RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 SHROOM1Q2M3G4 852 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 FAM83BQ5T0W9 1011 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 CCDC181Q5TID7 509 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 KRT79Q5XKE5 535 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 IQCEQ6IPM2 695 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 ADGRF4Q8IZF3 695 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 MYOCDQ8IZQ8 938 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 LSM14BQ9BX40 385 aaKnown RBP8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 DDX25Q9UHL0 483 aaKnown RBP8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 GRIN2DO15399 1336 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 POTEB3A0JP26 581 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 POTECB2RU33 542 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 PALMO75781 387 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 PRLRP16471 622 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 TCP1P17987 556 aaKnown RBP8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 KLRC1P26715 233 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 NT5C2P49902 561 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 POTEBQ6S5H4 581 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 SH2D3CQ8N5H7 860 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 FAM76AQ8TAV0 307 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 GOLPH3Q9H4A6 298 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 PANK4Q9NVE7 773 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 POLLQ9UGP5 575 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 DAGLAQ9Y4D2 1042 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 COL4A3BPQ9Y5P4 624 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 MYH4Q9Y623 1939 aa8.84□□□□□ -0.99
TNFRSF10B-208ENST00000523752 A0A087X0T9 212 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 PPFIA4O75335 1185 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 KRT14P02533 472 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 FAM228BP0C875 321 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 IL1R1P14778 569 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 STAT3P40763 770 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 CARSP49589 748 aaKnown RBP8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 CLK2P49760 499 aaKnown RBP8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 ITIH3Q06033 890 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 CCDC40Q4G0X9 1142 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 PRR5LQ6MZQ0 368 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 C8orf74Q6P047 294 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 KCTD1Q719H9 257 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 TEX2Q8IWB9 1127 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 SH3GL2Q99962 352 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 MXD3Q9BW11 206 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 PCDHA2Q9Y5H9 948 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 ABCB11O95342 1321 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 FAM170AA1A519 330 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 USP17L15C9J2P7 530 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 USP17L10C9JJH3 530 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 USP17L13C9JLJ4 530 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 USP17L11C9JVI0 530 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 USP17L18D6R9N7 530 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 USP17L22D6RA61 530 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 USP17L17D6RBQ6 530 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 USP17L19D6RCP7 530 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 USP17L20D6RJB6 530 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 RGL2O15211 777 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 SNHG28P0DPA3 235 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 SMARCA1P28370 1054 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 RFC4P35249 363 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 IRAK1P51617 712 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 CASP5P51878 434 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 PPARDQ03181 441 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 GABPAQ06546 454 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 USP17L24Q0WX57 530 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 PDIA5Q14554 519 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 FAM26FQ5R3K3 315 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 USP17L6PQ6QN14 398 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 FAM133AQ8N9E0 248 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 TBC1D5Q92609 795 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 NOX5Q96PH1 765 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 BCAS3Q9H6U6 928 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 NFU1Q9UMS0 254 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 GAKO14976 1311 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 RBAK-RBAKDNI3L0D1 243 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 ACTN1P12814 892 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 EPS15P42566 896 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 FKBP3Q00688 224 aaKnown RBP8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 ORC2Q13416 577 aaPredicted RBP8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 RAPGEF1Q13905 1077 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 KCTD16Q68DU8 428 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 SCFD1Q8WVM8 642 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 IQCDQ96DY2 449 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 ZIM3Q96PE6 472 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 RUFY1Q96T51 708 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 TSPYL1Q9H0U9 437 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 RIC8AQ9NPQ8 531 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 CEP72Q9P209 647 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 KIAA1024Q9UPX6 916 aa8.83□□□□□ -1
TNFRSF10B-208ENST00000523752 IGKV6D-41A0A0C4DH26 115 aa8.82□□□□□ -1
TNFRSF10B-208ENST00000523752 SSU72P8A0A1W2PR75 194 aa8.82□□□□□ -1
TNFRSF10B-208ENST00000523752 TAL1P17542 331 aaPredicted RBP8.82□□□□□ -1
TNFRSF10B-208ENST00000523752 KCNA4P22459 653 aa8.82□□□□□ -1
TNFRSF10B-208ENST00000523752 CCT5P48643 541 aa8.82□□□□□ -1
TNFRSF10B-208ENST00000523752 ZNF543Q08ER8 600 aa8.82□□□□□ -1
TNFRSF10B-208ENST00000523752 IKQ13123 557 aaPredicted RBP8.82□□□□□ -1
TNFRSF10B-208ENST00000523752 ASPRV1Q53RT3 343 aa8.82□□□□□ -1
TNFRSF10B-208ENST00000523752 SFMBT2Q5VUG0 894 aa8.82□□□□□ -1
TNFRSF10B-208ENST00000523752 PACS2Q86VP3 889 aa8.82□□□□□ -1
TNFRSF10B-208ENST00000523752 PROCA1Q8NCQ7 364 aaPredicted RBP8.82□□□□□ -1
TNFRSF10B-208ENST00000523752 RPGRQ92834 1020 aaKnown RBP8.82□□□□□ -1
TNFRSF10B-208ENST00000523752 TSG101Q99816 390 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms