RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 RPAP1Q9BWH6 1393 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-223ENST00000523636 MED23Q9ULK4 1368 aa6.42□□□□□ -1.38
PABPC1-223ENST00000523636 GNAT3A8MTJ3 354 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 HMGB1P1B2RPK0 211 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-223ENST00000523636 EIF4EBP3O60516 100 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-223ENST00000523636 AMPD1P23109 780 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 CDC27P30260 824 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 DGKGP49619 791 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 IGBP1P78318 339 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 PPATQ06203 517 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 PTPROQ16827 1216 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 EGFLAMQ63HQ2 1017 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 TTLL5Q6EMB2 1281 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 LURAP1LQ8IV03 231 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 TMEM87AQ8NBN3 555 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 ASAP3Q8TDY4 903 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 MFSD14AQ96MC6 490 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 WRNIP1Q96S55 665 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 SIN3AQ96ST3 1273 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 SH3TC1Q8TE82 1336 aa6.41□□□□□ -1.38
PABPC1-223ENST00000523636 MYO18BQ8IUG5 2567 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 METTL12A8MUP2 240 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 ARHGEF15O94989 841 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 MYOGP15173 224 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 CCL14Q16627 93 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 SPRED3Q2MJR0 410 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 LONRF3Q496Y0 759 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 TMEM240Q5SV17 173 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 DGLUCYQ7Z3D6 616 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 SVOPQ8N4V2 548 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 PMM1Q92871 262 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 KCNB2Q92953 911 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 WNT8BQ93098 351 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 COA7Q96BR5 231 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 THUMPD2Q9BTF0 503 aaKnown RBP6.4□□□□□ -1.38
PABPC1-223ENST00000523636 CEP44Q9C0F1 390 aa6.4□□□□□ -1.38
PABPC1-223ENST00000523636 CLEC4MQ9H2X3 399 aaPredicted RBP6.4□□□□□ -1.38
PABPC1-223ENST00000523636 TRMT112Q9UI30 125 aaKnown RBP6.4□□□□□ -1.38
PABPC1-223ENST00000523636 IGSF10Q6WRI0 2623 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 TLDC2A0PJX2 215 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 H3BRJ5 948 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 KIAA0355O15063 1070 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 EIF3JO75822 258 aaKnown RBP6.39□□□□□ -1.39
PABPC1-223ENST00000523636 HOXB4P17483 251 aaPredicted RBP6.39□□□□□ -1.39
PABPC1-223ENST00000523636 VCPP55072 806 aaKnown RBP6.39□□□□□ -1.39
PABPC1-223ENST00000523636 FPGSQ05932 587 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 PROSER3Q2NL68 480 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 SDE2Q6IQ49 451 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 GDF6Q6KF10 455 aaPredicted RBP6.39□□□□□ -1.39
PABPC1-223ENST00000523636 CCDC129Q6ZRS4 1044 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 VN1R5Q7Z5H4 357 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 BMP8AQ7Z5Y6 402 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 IL22RA1Q8N6P7 574 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 ANKRD13CQ8N6S4 541 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 NEDD1Q8NHV4 660 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 NOC4LQ9BVI4 516 aaKnown RBP6.39□□□□□ -1.39
PABPC1-223ENST00000523636 LACRTQ9GZZ8 138 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 SRA1Q9HD15 236 aaKnown RBP6.39□□□□□ -1.39
PABPC1-223ENST00000523636 ZNF70Q9UC06 446 aaPredicted RBP6.39□□□□□ -1.39
PABPC1-223ENST00000523636 AKAP2Q9Y2D5 859 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 FAN1Q9Y2M0 1017 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 XDHP47989 1333 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 IGF2RP11717 2491 aa6.39□□□□□ -1.39
PABPC1-223ENST00000523636 PTPN13Q12923 2485 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 NBPF19A0A087WUL8 3843 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-223ENST00000523636 H0Y858 1186 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 DNM1LO00429 736 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 PIK3R2O00459 728 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 U2SURPO15042 1029 aaKnown RBP6.38□□□□□ -1.39
PABPC1-223ENST00000523636 LPXNO60711 386 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 B3GALT4O96024 378 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 NID1P14543 1247 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 CYP2B6P20813 491 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 ERCC5P28715 1186 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-223ENST00000523636 TLE2Q04725 743 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 PCDH1Q08174 1060 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 FOXD4Q12950 439 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-223ENST00000523636 COL9A3Q14050 684 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-223ENST00000523636 ADAMTSL4Q6UY14 1074 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 SV2BQ7L1I2 683 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 WFDC8Q8IUA0 241 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 MAP4K3Q8IVH8 894 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 USP6NLQ92738 828 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 ATOH1Q92858 354 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-223ENST00000523636 FAM89AQ96GI7 184 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 SOX17Q9H6I2 414 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-223ENST00000523636 TDRD3Q9H7E2 651 aaKnown RBP6.38□□□□□ -1.39
PABPC1-223ENST00000523636 TLR9Q9NR96 1032 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 CHPF2Q9P2E5 772 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 TTF2Q9UNY4 1162 aaKnown RBP6.38□□□□□ -1.39
PABPC1-223ENST00000523636 SMCHD1A6NHR9 2005 aa6.38□□□□□ -1.39
PABPC1-223ENST00000523636 FREM2Q5SZK8 3169 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 ANKRD17O75179 2603 aaKnown RBP6.37□□□□□ -1.39
PABPC1-223ENST00000523636 ZNF462Q96JM2 2506 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 A0A0G2JLL6 359 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-223ENST00000523636 TCP10L2B9ZVM9 353 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 F8W031 263 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-223ENST00000523636 PEX10O60683 326 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 ANXA1P04083 346 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms