RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 SYCE1Q8N0S2 351 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 TEKT3Q9BXF9 490 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 TDRD3Q9H7E2 651 aaKnown RBP12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 GPR75-ASB3A0A0A6YYF3 556 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 POTEB3A0JP26 581 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 POTECB2RU33 542 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 SRGAP2O75044 1071 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 ZBED4O75132 1171 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 RAD17O75943 681 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 RHOBTB3O94955 611 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 CC2D1AQ6P1N0 951 aaPredicted RBP12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 POTEBQ6S5H4 581 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 ARFGAP2Q8N6H7 521 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 FNBP1Q96RU3 617 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 ZMYND12Q9H0C1 365 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 ABCB6Q9NP58 842 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 CCPG1Q9ULG6 757 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 EXOC7Q9UPT5 735 aa12.36□□□□□ -0.43
PCDHGB4-201ENST00000519479 K7ENM7 598 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 AFPP02771 609 aaKnown RBP12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 GYPCP04921 128 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 HPDP32754 393 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 GUCY2FP51841 1108 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 GUF1Q8N442 669 aaKnown RBP12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 FAM212AQ96EL1 285 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 MTUS1Q9ULD2 1270 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 PRPF6O94906 941 aaKnown RBP12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 COASYQ13057 564 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 SEL1L2Q5TEA6 688 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 PAF1Q8N7H5 531 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 ZNF577Q9BSK1 485 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 PDS5AQ29RF7 1337 aaKnown RBP12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 TESPA1A2RU30 521 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 PDHBP11177 359 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 TGFB2P61812 414 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 ARHGAP4P98171 946 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 MAP2K1Q02750 393 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 C2orf54Q08AI8 447 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 PPFIA1Q13136 1202 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 SEMA3FQ13275 785 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 ZSCAN26Q16670 478 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 CCDC25Q86WR0 208 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 DCAF4Q8WV16 495 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 ADAMTS1Q9UHI8 967 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 HARSP12081 509 aaKnown RBP12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 ZNF543Q08ER8 600 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 AP3B2Q13367 1082 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 CCDC50Q8IVM0 306 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 REXO1L1PQ8IX06 675 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 POLD4Q9HCU8 107 aa12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 UTP11Q9Y3A2 253 aaKnown RBP12.35□□□□□ -0.43
PCDHGB4-201ENST00000519479 F5H6K3 240 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 KLRC3Q07444 240 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 FAM186BQ8IYM0 893 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 MED4Q9NPJ6 270 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 AMFRQ9UKV5 643 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 CAPN11Q9UMQ6 739 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 LRRC53A6NM62 1247 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 FTCDO95954 541 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 DESP17661 470 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 GBP2P32456 591 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 RASGRP2Q7LDG7 609 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 GOLGA5Q8TBA6 731 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 KIFAP3Q92845 792 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 DCPSQ96C86 337 aaKnown RBP12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 IFT74Q96LB3 600 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 MXD3Q9BW11 206 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 MTRF1LQ9UGC7 380 aaKnown RBP12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 TRPM3Q9HCF6 1732 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 ITIH6Q6UXX5 1313 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 TCHHQ07283 1943 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 SFI1A8K8P3 1242 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 PPARDQ03181 441 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 MIGA2Q7L4E1 593 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 KRT26Q7Z3Y9 468 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 UBL4BQ8N7F7 174 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 GIMAP8Q8ND71 665 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 LRRC45Q96CN5 670 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 HDAC6Q9UBN7 1215 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 BZW2Q9Y6E2 419 aaKnown RBP12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 MORC2Q9Y6X9 1032 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 NHSL1Q5SYE7 1610 aa12.34□□□□□ -0.43
PCDHGB4-201ENST00000519479 GOLGA6L7A0A1B0GV03 622 aa12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 SERPING1P05155 500 aa12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 GAP43P17677 238 aa12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 HOXA7P31268 230 aaPredicted RBP12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 MAP3K9P80192 1104 aa12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 CTTNQ14247 550 aaKnown RBP12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 PPP1R7Q15435 360 aa12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 WDR44Q5JSH3 913 aa12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 POTEAQ6S8J7 498 aa12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 NLRX1Q86UT6 975 aa12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 SULF1Q8IWU6 871 aa12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 PROM2Q8N271 834 aa12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 FAM71BQ8TC56 605 aa12.33□□□□□ -0.43
PCDHGB4-201ENST00000519479 FAM205AQ6ZU69 1335 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 POTEFA5A3E0 1075 aa12.33□□□□□ -0.44
PCDHGB4-201ENST00000519479 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms