RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 IQCEQ6IPM2 695 aa20.32■□□□□ 0.84
SDC2-202ENST00000518385 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.32■□□□□ 0.848e-7■■□□□ 13.1
SDC2-202ENST00000518385 MBOAT7Q96N66 472 aa20.32■□□□□ 0.84
SDC2-202ENST00000518385 NUP88Q99567 741 aaPredicted RBP20.32■□□□□ 0.84
SDC2-202ENST00000518385 WDR18Q9BV38 432 aa20.32■□□□□ 0.84
SDC2-202ENST00000518385 LRRC27Q9C0I9 530 aa20.32■□□□□ 0.84
SDC2-202ENST00000518385 KIAA1683Q9H0B3 1180 aa20.32■□□□□ 0.84
SDC2-202ENST00000518385 LZTFL1Q9NQ48 299 aa20.32■□□□□ 0.84
SDC2-202ENST00000518385 PICK1Q9NRD5 415 aa20.32■□□□□ 0.84
SDC2-202ENST00000518385 ABHD10Q9NUJ1 306 aa20.32■□□□□ 0.84
SDC2-202ENST00000518385 LRWD1Q9UFC0 647 aa20.32■□□□□ 0.84
SDC2-202ENST00000518385 DDX25Q9UHL0 483 aaKnown RBP20.32■□□□□ 0.84
SDC2-202ENST00000518385 DOCK1Q14185 1865 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 DCAF8L1A6NGE4 600 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 TEX33O43247 280 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 EDIL3O43854 480 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 GYPCP04921 128 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 CAPN2P17655 700 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 CDC25AP30304 524 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 LMAN1P49257 510 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 UBE2SQ16763 222 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 SPICE1Q8N0Z3 855 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 SLC35F6Q8N357 371 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 CDCA5Q96FF9 252 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 C7orf25Q9BPX7 421 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 MYO6Q9UM54 1294 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 STK24Q9Y6E0 443 aa20.31■□□□□ 0.84
SDC2-202ENST00000518385 H3BQF6 201 aa20.3■□□□□ 0.84
SDC2-202ENST00000518385 PIK3CDO00329 1044 aa20.3■□□□□ 0.84
SDC2-202ENST00000518385 PPP1R12BO60237 982 aaPredicted RBP20.3■□□□□ 0.84
SDC2-202ENST00000518385 CASP14P31944 242 aa20.3■□□□□ 0.84
SDC2-202ENST00000518385 TXKP42681 527 aa20.3■□□□□ 0.84
SDC2-202ENST00000518385 KRT83P78385 493 aa20.3■□□□□ 0.84
SDC2-202ENST00000518385 AMPD2Q01433 879 aa20.3■□□□□ 0.84
SDC2-202ENST00000518385 PAK1Q13153 545 aa20.3■□□□□ 0.84
SDC2-202ENST00000518385 SRLQ86TD4 932 aa20.3■□□□□ 0.84
SDC2-202ENST00000518385 ANO3Q9BYT9 981 aa20.3■□□□□ 0.84
SDC2-202ENST00000518385 AS3MTQ9HBK9 375 aa20.3■□□□□ 0.84
SDC2-202ENST00000518385 PRR12Q9ULL5 1215 aa20.3■□□□□ 0.84
SDC2-202ENST00000518385 PP2D1A8MPX8 630 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 MEIS2O14770 477 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 N4BP3O15049 544 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 TBX3O15119 743 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 RHOBTB3O94955 611 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 TDP2O95551 362 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 PLCG1P19174 1290 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 EEF1GP26641 437 aaKnown RBP20.29■□□□□ 0.84
SDC2-202ENST00000518385 COPB1P53618 953 aaKnown RBP20.29■□□□□ 0.84
SDC2-202ENST00000518385 PRKG1Q13976 671 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 CASP8Q14790 479 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 ZYXQ15942 572 aaKnown RBP20.29■□□□□ 0.84
SDC2-202ENST00000518385 TSR1Q2NL82 804 aaKnown RBP20.29■□□□□ 0.84
SDC2-202ENST00000518385 KRT79Q5XKE5 535 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 SLFN12Q8IYM2 578 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 RETREG2Q8NC44 543 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 NUP58Q9BVL2 599 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 BLZF1Q9H2G9 400 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 PDE11AQ9HCR9 933 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 ABCB6Q9NP58 842 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 FEM1BQ9UK73 627 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 ANO9A1A5B4 782 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 SLC37A4O43826 429 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 NF2P35240 595 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 STIM1Q13586 685 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 MTF1Q14872 753 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 FAM83BQ5T0W9 1011 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 CRYGNQ8WXF5 182 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 MMTAG2Q9BU76 263 aaKnown RBP20.29■□□□□ 0.84
SDC2-202ENST00000518385 RRAGCQ9HB90 399 aa20.29■□□□□ 0.84
SDC2-202ENST00000518385 A6NNZ2 444 aa20.28■□□□□ 0.84
SDC2-202ENST00000518385 CD44P16070 742 aaKnown RBP20.28■□□□□ 0.84
SDC2-202ENST00000518385 ARHGAP25P42331 645 aa20.28■□□□□ 0.84
SDC2-202ENST00000518385 KRT31Q15323 416 aa20.28■□□□□ 0.84
SDC2-202ENST00000518385 TUBB8Q3ZCM7 444 aa20.28■□□□□ 0.84
SDC2-202ENST00000518385 CNNM4Q6P4Q7 775 aa20.28■□□□□ 0.84
SDC2-202ENST00000518385 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.28■□□□□ 0.84
SDC2-202ENST00000518385 ZNF280CQ8ND82 737 aa20.28■□□□□ 0.84
SDC2-202ENST00000518385 LPAR1Q92633 364 aa20.28■□□□□ 0.84
SDC2-202ENST00000518385 STAMQ92783 540 aa20.28■□□□□ 0.84
SDC2-202ENST00000518385 VPS18Q9P253 973 aa20.28■□□□□ 0.84
SDC2-202ENST00000518385 CLEC11AQ9Y240 323 aa20.28■□□□□ 0.84
SDC2-202ENST00000518385 SPDYE3A6NKU9 549 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 USP17L15C9J2P7 530 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 USP17L13C9JLJ4 530 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 USP17L11C9JVI0 530 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 USP17L18D6R9N7 530 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 USP17L22D6RA61 530 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 USP17L17D6RBQ6 530 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 USP17L19D6RCP7 530 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 USP17L20D6RJB6 530 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 MYO1CO00159 1063 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 MARCH6O60337 910 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 CLSTN1O94985 981 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 CASP1P29466 404 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 USP14P54578 494 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 USP17L24Q0WX57 530 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 SPP2Q13103 211 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 COBLL1Q53SF7 1204 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 TCP11X2Q5H9J9 407 aa20.27■□□□□ 0.84
SDC2-202ENST00000518385 CCDC70Q6NSX1 233 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms