RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 V9GY48 417 aaPredicted RBP12.7□□□□□ -0.38
UBE2D3-232ENST00000514755 NID2Q14112 1375 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 KIAA1217Q5T5P2 1943 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 GUCA2AQ02747 115 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 SNX17Q15036 470 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 STXBP2Q15833 593 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 NTRK3Q16288 839 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 UBE2SQ16763 222 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 LY6KQ17RY6 165 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 CCDC62Q6P9F0 684 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 HEATR3Q7Z4Q2 680 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 IWS1Q96ST2 819 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 MPHOSPH6Q99547 160 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 TSEN34Q9BSV6 310 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 STARD7Q9NQZ5 370 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 PDRG1Q9NUG6 133 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 PCDHGC3Q9UN70 934 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 ATP11BQ9Y2G3 1177 aa12.69□□□□□ -0.38
UBE2D3-232ENST00000514755 FRMPD4Q14CM0 1322 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 ADAMTS3O15072 1205 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 DTNBO60941 627 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 TXNP10599 105 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 MRPS9P82933 396 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 TRAF1Q13077 416 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 PPP2R5BQ15173 497 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 PKN1Q16512 942 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 FSCN1Q16658 493 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 BLOC1S3Q6QNY0 202 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 CXCL17Q6UXB2 119 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 VSIG10LQ86VR7 867 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 SAMD3Q8N6K7 520 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 OR6J1Q8NGC5 347 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 SMARCC2Q8TAQ2 1214 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 SCFD2Q8WU76 684 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 PHKBQ93100 1093 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 SPC25Q9HBM1 224 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 SLC27A5Q9Y2P5 690 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 Q9Y3F1 56 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 NR2E3Q9Y5X4 410 aa12.68□□□□□ -0.38
UBE2D3-232ENST00000514755 B4DLN1 442 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 STXBP3O00186 592 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 PIK3CDO00329 1044 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 SORBS3O60504 671 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 NR1I2O75469 434 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 EIF3JO75822 258 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 MRPL12P52815 198 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 STK3Q13188 491 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 TTLL4Q14679 1199 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 SH3RF1Q7Z6J0 888 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 PCSK9Q8NBP7 692 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 IL17RAQ96F46 866 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 PGBD1Q96JS3 809 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 AP5M1Q9H0R1 490 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 PSTPIP2Q9H939 334 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 RTEL1Q9NZ71 1219 aa12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 DDX41Q9UJV9 622 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-232ENST00000514755 GRIN2DO15399 1336 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 CEP290O15078 2479 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 AK2P54819 239 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 NAPAP54920 295 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 ANAPC15P60006 121 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 PSMC6P62333 389 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 SP2Q02086 613 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 TLE2Q04725 743 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 ARHGAP1Q07960 439 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 PFKFB3Q16875 520 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 C1orf53Q5VUE5 145 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 PPP1R13LQ8WUF5 828 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 GLT1D1Q96MS3 346 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 PRO3102Q9H379 93 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 BCAS3Q9H6U6 928 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 BARHL2Q9NY43 387 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 TPCN1Q9ULQ1 816 aa12.66□□□□□ -0.38
UBE2D3-232ENST00000514755 CCDC196A0A1B0GTZ2 297 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 TRIM43BA6NCK2 446 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 SMCO2A6NFE2 343 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 NKRFO15226 690 aaKnown RBP eCLIP12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 PRPF3O43395 683 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 PQBP1O60828 265 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 LILRB3O75022 631 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 SCG2P13521 617 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 ITGB8P26012 769 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 CCND2P30279 289 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 CDK7P50613 346 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 SCRN1Q12765 414 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 SEMA3FQ13275 785 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 CUL5Q93034 780 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 VTI1AQ96AJ9 217 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 TRIM43Q96BQ3 446 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 ZNF274Q96GC6 653 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 MTRQ99707 1265 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 SLC26A6Q9BXS9 759 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 PDLIM7Q9NR12 457 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 TMEM260Q9NX78 707 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 PCDHA6Q9UN73 950 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 PCDHA8Q9Y5H6 950 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 MRVI1Q9Y6F6 885 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 DNAH12Q6ZR08 3092 aa12.65□□□□□ -0.38
UBE2D3-232ENST00000514755 ELP1O95163 1332 aa12.64□□□□□ -0.39
UBE2D3-232ENST00000514755 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms