RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 FBXO40Q9UH90 709 aa10.29□□□□□ -0.76
NR1I3-230ENST00000511944 KCNH3Q9ULD8 1083 aa10.29□□□□□ -0.76
NR1I3-230ENST00000511944 AGTPBP1Q9UPW5 1226 aa10.29□□□□□ -0.76
NR1I3-230ENST00000511944 RBBP6Q7Z6E9 1792 aaKnown RBP10.29□□□□□ -0.76
NR1I3-230ENST00000511944 BAZ2BQ9UIF8 2168 aaKnown RBP10.28□□□□□ -0.76
NR1I3-230ENST00000511944 ADAMTS3O15072 1205 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 GDF9O60383 454 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 CCNT1O60563 726 aaKnown RBP10.28□□□□□ -0.76
NR1I3-230ENST00000511944 ZNF202O95125 648 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 MYL1P05976 194 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 BCRP11274 1271 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 WNT7BP56706 349 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 ARHGAP4P98171 946 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 SETQ01105 290 aaPredicted RBP10.28□□□□□ -0.76
NR1I3-230ENST00000511944 LETM2Q2VYF4 491 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 USH1GQ495M9 461 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 NOM1Q5C9Z4 860 aaKnown RBP10.28□□□□□ -0.76
NR1I3-230ENST00000511944 L1TD1Q5T7N2 865 aaKnown RBP10.28□□□□□ -0.76
NR1I3-230ENST00000511944 C2orf69Q8N8R5 385 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 IGSF22Q8N9C0 903 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 MTMR9Q96QG7 549 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 CCSER1Q9C0I3 900 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 CSRNP2Q9H175 543 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 GBA2Q9HCG7 927 aaPredicted RBP10.28□□□□□ -0.76
NR1I3-230ENST00000511944 ZNF214Q9UL59 606 aaPredicted RBP10.28□□□□□ -0.76
NR1I3-230ENST00000511944 PTPRFP10586 1907 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 RPTORQ8N122 1335 aa10.28□□□□□ -0.76
NR1I3-230ENST00000511944 RLFQ13129 1914 aa10.27□□□□□ -0.76
NR1I3-230ENST00000511944 POLR2AP24928 1970 aaKnown RBP10.27□□□□□ -0.77
NR1I3-230ENST00000511944 A0A1B0GVL5 298 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 GOLGA6L3A6NEY3 463 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 WNT7AO00755 349 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 SLFN14P0C7P3 912 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 ATP2B1P20020 1258 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 FOXC1Q12948 553 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 IRF5Q13568 498 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 CALCRLQ16602 461 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 UBE2SQ16763 222 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 CCDC174Q6PII3 467 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 USP17L6PQ6QN14 398 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 SH3RF1Q7Z6J0 888 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 ARMC2Q8NEN0 867 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 CHST13Q8NET6 341 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 CLEC4DQ8WXI8 215 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 OPTNQ96CV9 577 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 ATG4CQ96DT6 458 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 SLC10A4Q96EP9 437 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 GTPBP4Q9BZE4 634 aaKnown RBP10.27□□□□□ -0.77
NR1I3-230ENST00000511944 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.77
NR1I3-230ENST00000511944 ELP3Q9H9T3 547 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 RRAGCQ9HB90 399 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 ZCCHC17Q9NP64 241 aaKnown RBP10.27□□□□□ -0.77
NR1I3-230ENST00000511944 KCNMB3Q9NPA1 279 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 TMEM260Q9NX78 707 aa10.27□□□□□ -0.77
NR1I3-230ENST00000511944 DDX25Q9UHL0 483 aaKnown RBP10.27□□□□□ -0.77
NR1I3-230ENST00000511944 LOC102724159A0A0B4J2E5 919 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 SYCE3A1L190 88 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 VWA3AA6NCI4 1184 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 STAM2O75886 525 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 SLC25A27O95847 323 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 CFBP00751 764 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 CETPP11597 493 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 MRE11P49959 708 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 GTF2A2P52657 109 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 IRX3P78415 501 aaPredicted RBP10.26□□□□□ -0.77
NR1I3-230ENST00000511944 PRKG1Q13976 671 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 PWP2Q15269 919 aaKnown RBP10.26□□□□□ -0.77
NR1I3-230ENST00000511944 MAP1SQ66K74 1059 aaPredicted RBP10.26□□□□□ -0.77
NR1I3-230ENST00000511944 PDXDC2PQ6P474 469 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 KRBA2Q6ZNG9 492 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 IQUBQ8NA54 791 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 AGBL1Q96MI9 1066 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 CLIC6Q96NY7 704 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 SDF4Q9BRK5 362 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 FUCA2Q9BTY2 467 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 TSPY26PQ9H489 355 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 PFASO15067 1338 aa10.26□□□□□ -0.77
NR1I3-230ENST00000511944 EDIL3O43854 480 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 MUTP22033 750 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 MOGSQ13724 837 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 CT47A1Q5JQC4 288 aaPredicted RBP10.25□□□□□ -0.77
NR1I3-230ENST00000511944 NT5DC1Q5TFE4 455 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 PCNX4Q63HM2 1172 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 SASS6Q6UVJ0 657 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 ANKRD23Q86SG2 305 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 RIOX2Q8IUF8 465 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 CEP57L1Q8IYX8 460 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 TRIML1Q8N9V2 468 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 CNNM3Q8NE01 707 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 SHCBP1Q8NEM2 672 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 SPATA20Q8TB22 786 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 CLMNQ96JQ2 1002 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 MRGPRX2Q96LB1 330 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 TRERF1Q96PN7 1200 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 TMEM60Q9H2L4 133 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 ACAD9Q9H845 621 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 RAVER2Q9HCJ3 691 aaKnown RBP10.25□□□□□ -0.77
NR1I3-230ENST00000511944 RNF146Q9NTX7 359 aa10.25□□□□□ -0.77
NR1I3-230ENST00000511944 STK17AQ9UEE5 414 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms