RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 H3BRB1 525 aa24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 ZNF286BP0CG31 522 aa24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 CSF2RAP15509 400 aa24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 RFC2P35250 354 aa24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 CEP55Q53EZ4 464 aa24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 NIPA1Q7RTP0 329 aa24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 CAGE1Q8TC20 777 aa24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 RNPC3Q96LT9 517 aaKnown RBP24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 GPR20Q99678 358 aa24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 MXRA8Q9BRK3 442 aa24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 C16orf70Q9BSU1 422 aa24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 SLKQ9H2G2 1235 aaPredicted RBP24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 TUT1Q9H6E5 874 aaKnown RBP24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 IL23AQ9NPF7 189 aa24.35■■□□□ 1.49
UBE2D3-229ENST00000510129 LGALS2P05162 132 aa24.34■■□□□ 1.49
UBE2D3-229ENST00000510129 ZNF76P36508 570 aa24.34■■□□□ 1.49
UBE2D3-229ENST00000510129 C22orf23Q9BZE7 217 aa24.34■■□□□ 1.49
UBE2D3-229ENST00000510129 SOX1O00570 391 aaPredicted RBP24.33■■□□□ 1.49
UBE2D3-229ENST00000510129 SORBS3O60504 671 aa24.33■■□□□ 1.49
UBE2D3-229ENST00000510129 PARNO95453 639 aaKnown RBP24.33■■□□□ 1.49
UBE2D3-229ENST00000510129 KCNA2P16389 499 aa24.33■■□□□ 1.49
UBE2D3-229ENST00000510129 ARHGAP4P98171 946 aa24.33■■□□□ 1.49
UBE2D3-229ENST00000510129 C9orf50Q5SZB4 431 aa24.33■■□□□ 1.49
UBE2D3-229ENST00000510129 GALNT17Q6IS24 598 aa24.33■■□□□ 1.49
UBE2D3-229ENST00000510129 ALG1Q9BT22 464 aa24.33■■□□□ 1.49
UBE2D3-229ENST00000510129 PCDH10Q9P2E7 1040 aa24.33■■□□□ 1.49
UBE2D3-229ENST00000510129 CYP3A4P08684 503 aa24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 GNAT1P11488 350 aa24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 CYP2C9P11712 490 aa24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 EPHB4P54760 987 aa24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 SMAD3P84022 425 aaKnown RBP24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 STK3Q13188 491 aa24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 JAKMIP3Q5VZ66 844 aa24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 SEPT1Q8WYJ6 367 aa24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 SDF4Q9BRK5 362 aa24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 KCNH7Q9NS40 1196 aa24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 TMEM260Q9NX78 707 aa24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 HDAC6Q9UBN7 1215 aa24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 NFASCO94856 1347 aa24.32■■□□□ 1.48
UBE2D3-229ENST00000510129 MEIS1O00470 390 aa24.31■■□□□ 1.48
UBE2D3-229ENST00000510129 PFKFB2O60825 505 aa24.31■■□□□ 1.48
UBE2D3-229ENST00000510129 XBP1P17861 261 aa24.31■■□□□ 1.48
UBE2D3-229ENST00000510129 NLRP5P59047 1200 aa24.31■■□□□ 1.48
UBE2D3-229ENST00000510129 PTK7Q13308 1070 aa24.31■■□□□ 1.48
UBE2D3-229ENST00000510129 GDF6Q6KF10 455 aaPredicted RBP24.31■■□□□ 1.48
UBE2D3-229ENST00000510129 AFAP1L1Q8TED9 768 aa24.31■■□□□ 1.48
UBE2D3-229ENST00000510129 LRCH3Q96II8 777 aa24.31■■□□□ 1.48
UBE2D3-229ENST00000510129 JPH1Q9HDC5 661 aaPredicted RBP24.31■■□□□ 1.48
UBE2D3-229ENST00000510129 ATP9AO75110 1047 aa24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 FGBP02675 491 aa24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 CCL23P55773 120 aa24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 SETQ01105 290 aaPredicted RBP24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 RBL2Q08999 1139 aa24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 TMEM240Q5SV17 173 aa24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 FAM109BQ6ICB4 259 aaPredicted RBP24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 TNPO1Q92973 898 aaKnown RBP24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 PGBD1Q96JS3 809 aa24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.3■■□□□ 1.485e-7■■■■□ 24.9
UBE2D3-229ENST00000510129 WNT8AQ9H1J5 351 aa24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 VPS54Q9P1Q0 977 aa24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 TPCN1Q9ULQ1 816 aa24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 STK36Q9NRP7 1315 aa24.3■■□□□ 1.48
UBE2D3-229ENST00000510129 TCF7P36402 384 aaPredicted RBP24.29■■□□□ 1.48
UBE2D3-229ENST00000510129 NEK4P51957 841 aa24.29■■□□□ 1.48
UBE2D3-229ENST00000510129 AK2P54819 239 aa24.29■■□□□ 1.48
UBE2D3-229ENST00000510129 SCRN1Q12765 414 aa24.29■■□□□ 1.48
UBE2D3-229ENST00000510129 WASF1Q92558 559 aa24.29■■□□□ 1.48
UBE2D3-229ENST00000510129 LARP6Q9BRS8 491 aaKnown RBP24.29■■□□□ 1.48
UBE2D3-229ENST00000510129 SLC9A2Q9UBY0 812 aa24.29■■□□□ 1.48
UBE2D3-229ENST00000510129 UMODL1Q5DID0 1318 aa24.29■■□□□ 1.48
UBE2D3-229ENST00000510129 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 C17orf102A2RUQ5 167 aa24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 IQCF3P0C7M6 154 aa24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 ACTN1P12814 892 aa24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 SP4Q02446 784 aa24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 ZNF365Q70YC5 407 aa24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 CRYGNQ8WXF5 182 aa24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 HERVK_113Q902F9 699 aa24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 SMARCAD1Q9H4L7 1026 aa24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 BCAS3Q9H6U6 928 aa24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 ERAP1Q9NZ08 941 aa24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 PCDHA4Q9UN74 947 aa24.28■■□□□ 1.48
UBE2D3-229ENST00000510129 USP11P51784 963 aa24.27■■□□□ 1.48
UBE2D3-229ENST00000510129 C16orf59Q7L2K0 433 aa24.27■■□□□ 1.48
UBE2D3-229ENST00000510129 IL27Q8NEV9 243 aa24.27■■□□□ 1.48
UBE2D3-229ENST00000510129 AZI2Q9H6S1 392 aa24.27■■□□□ 1.48
UBE2D3-229ENST00000510129 AGO4Q9HCK5 861 aaKnown RBP24.27■■□□□ 1.48
UBE2D3-229ENST00000510129 EMSYQ7Z589 1322 aa24.27■■□□□ 1.48
UBE2D3-229ENST00000510129 PPFIA3O75145 1194 aa24.26■■□□□ 1.47
UBE2D3-229ENST00000510129 CAND2O75155 1236 aa24.26■■□□□ 1.47
UBE2D3-229ENST00000510129 SEC24BO95487 1268 aa24.26■■□□□ 1.47
UBE2D3-229ENST00000510129 SMIM10L2AP0DMW4 78 aa24.26■■□□□ 1.47
UBE2D3-229ENST00000510129 SMIM10L2BP0DMW5 78 aa24.26■■□□□ 1.47
UBE2D3-229ENST00000510129 ACRP10323 421 aa24.26■■□□□ 1.47
UBE2D3-229ENST00000510129 SELPP16109 830 aa24.26■■□□□ 1.47
UBE2D3-229ENST00000510129 HOXC8P31273 242 aa24.26■■□□□ 1.47
UBE2D3-229ENST00000510129 CIITAP33076 1130 aa24.26■■□□□ 1.47
UBE2D3-229ENST00000510129 UTP14CQ5TAP6 766 aaKnown RBP24.26■■□□□ 1.47
UBE2D3-229ENST00000510129 RASIP1Q5U651 963 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms