RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 CDHR1Q96JP9 859 aa27.59■■■□□ 2.01
SRPK1-210ENST00000508473 GPR20Q99678 358 aa27.59■■■□□ 2.01
SRPK1-210ENST00000508473 SENP7Q9BQF6 1050 aa27.59■■■□□ 2.01
SRPK1-210ENST00000508473 HDAC6Q9UBN7 1215 aa27.59■■■□□ 2.01
SRPK1-210ENST00000508473 HAS3O00219 553 aa27.58■■■□□ 2.01
SRPK1-210ENST00000508473 ACRP10323 421 aa27.58■■■□□ 2.01
SRPK1-210ENST00000508473 KCNA2P16389 499 aa27.58■■■□□ 2.01
SRPK1-210ENST00000508473 AK2P54819 239 aa27.58■■■□□ 2.01
SRPK1-210ENST00000508473 PTGISQ16647 500 aa27.58■■■□□ 2.01
SRPK1-210ENST00000508473 MXRA8Q9BRK3 442 aa27.58■■■□□ 2.01
SRPK1-210ENST00000508473 C16orf70Q9BSU1 422 aa27.58■■■□□ 2.01
SRPK1-210ENST00000508473 WNT8AQ9H1J5 351 aa27.58■■■□□ 2.01
SRPK1-210ENST00000508473 SLKQ9H2G2 1235 aaPredicted RBP27.58■■■□□ 2.01
SRPK1-210ENST00000508473 LGALS2P05162 132 aa27.57■■■□□ 2
SRPK1-210ENST00000508473 SREBF1P36956 1147 aa27.57■■■□□ 2
SRPK1-210ENST00000508473 SCRN1Q12765 414 aa27.57■■■□□ 2
SRPK1-210ENST00000508473 CPLX2Q6PUV4 134 aaKnown RBP27.57■■■□□ 2
SRPK1-210ENST00000508473 C16orf59Q7L2K0 433 aa27.57■■■□□ 2
SRPK1-210ENST00000508473 SESTD1Q86VW0 696 aa27.57■■■□□ 2
SRPK1-210ENST00000508473 RASGRP4Q8TDF6 673 aa27.57■■■□□ 2
SRPK1-210ENST00000508473 IL17RAQ96F46 866 aa27.57■■■□□ 2
SRPK1-210ENST00000508473 SCLYQ96I15 445 aa27.57■■■□□ 2
SRPK1-210ENST00000508473 RNPC3Q96LT9 517 aaKnown RBP27.57■■■□□ 2
SRPK1-210ENST00000508473 DTNBO60941 627 aa27.56■■■□□ 2
SRPK1-210ENST00000508473 GNA11P29992 359 aa27.56■■■□□ 2
SRPK1-210ENST00000508473 C8orf34Q49A92 452 aa27.56■■■□□ 2
SRPK1-210ENST00000508473 UTP14CQ5TAP6 766 aaKnown RBP27.56■■■□□ 2
SRPK1-210ENST00000508473 REXO1Q8N1G1 1221 aaKnown RBP27.56■■■□□ 2
SRPK1-210ENST00000508473 GIMAP8Q8ND71 665 aaPredicted RBP27.56■■■□□ 2
SRPK1-210ENST00000508473 CCDC148Q8NFR7 591 aa27.56■■■□□ 2
SRPK1-210ENST00000508473 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.56■■■□□ 21e-9■□□□□ 9.4
SRPK1-210ENST00000508473 GTF2IRD1Q9UHL9 959 aa27.56■■■□□ 2
SRPK1-210ENST00000508473 ZNF76P36508 570 aa27.55■■■□□ 2
SRPK1-210ENST00000508473 ARHGAP4P98171 946 aa27.55■■■□□ 2
SRPK1-210ENST00000508473 ANKRD1Q15327 319 aa27.55■■■□□ 2
SRPK1-210ENST00000508473 TRIM50Q86XT4 487 aa27.55■■■□□ 2
SRPK1-210ENST00000508473 KCNH7Q9NS40 1196 aa27.55■■■□□ 2
SRPK1-210ENST00000508473 LAMA3Q16787 3333 aa27.54■■■□□ 2
SRPK1-210ENST00000508473 H3BRB1 525 aa27.54■■■□□ 2
SRPK1-210ENST00000508473 PFKFB2O60825 505 aa27.54■■■□□ 2
SRPK1-210ENST00000508473 DEXIO95424 95 aa27.54■■■□□ 2
SRPK1-210ENST00000508473 ARP10275 920 aa27.54■■■□□ 2
SRPK1-210ENST00000508473 NEK4P51957 841 aa27.54■■■□□ 2
SRPK1-210ENST00000508473 NLRP5P59047 1200 aa27.54■■■□□ 2
SRPK1-210ENST00000508473 ZNF200P98182 395 aaPredicted RBP27.54■■■□□ 2
SRPK1-210ENST00000508473 CEP55Q53EZ4 464 aa27.54■■■□□ 2
SRPK1-210ENST00000508473 AIFM3Q96NN9 605 aa27.54■■■□□ 2
SRPK1-210ENST00000508473 CTAGE1Q96RT6 745 aa27.54■■■□□ 2
SRPK1-210ENST00000508473 TUT1Q9H6E5 874 aaKnown RBP27.54■■■□□ 2
SRPK1-210ENST00000508473 IL23AQ9NPF7 189 aa27.54■■■□□ 2
SRPK1-210ENST00000508473 DOCK5Q9H7D0 1870 aa27.53■■■□□ 2
SRPK1-210ENST00000508473 MAFGO15525 162 aa27.53■■■□□ 2
SRPK1-210ENST00000508473 TMEM240Q5SV17 173 aa27.53■■■□□ 2
SRPK1-210ENST00000508473 ZNF365Q70YC5 407 aa27.53■■■□□ 2
SRPK1-210ENST00000508473 SH3GLB2Q9NR46 395 aa27.53■■■□□ 2
SRPK1-210ENST00000508473 HIC1Q14526 733 aa27.52■■■□□ 2
SRPK1-210ENST00000508473 RETREG2Q8NC44 543 aa27.52■■■□□ 2
SRPK1-210ENST00000508473 BICD2Q8TD16 824 aa27.52■■■□□ 2
SRPK1-210ENST00000508473 MEIS1O00470 390 aa27.51■■□□□ 1.99
SRPK1-210ENST00000508473 TCF7P36402 384 aaPredicted RBP27.51■■□□□ 1.99
SRPK1-210ENST00000508473 BFSP2Q13515 415 aa27.51■■□□□ 1.99
SRPK1-210ENST00000508473 MCTP2Q6DN12 878 aa27.51■■□□□ 1.99
SRPK1-210ENST00000508473 NECAB1Q8N987 351 aa27.51■■□□□ 1.99
SRPK1-210ENST00000508473 UIMC1Q96RL1 719 aa27.51■■□□□ 1.99
SRPK1-210ENST00000508473 GSTTP1A0A1W2PQM5 241 aa27.5■■□□□ 1.99
SRPK1-210ENST00000508473 FAM86B1E9PN63 330 aa27.5■■□□□ 1.99
SRPK1-210ENST00000508473 CDKL5O76039 1030 aa27.5■■□□□ 1.99
SRPK1-210ENST00000508473 LARGE1O95461 756 aa27.5■■□□□ 1.99
SRPK1-210ENST00000508473 FAM86B2P0C5J1 330 aa27.5■■□□□ 1.99
SRPK1-210ENST00000508473 PSRC1Q6PGN9 363 aaPredicted RBP27.5■■□□□ 1.99
SRPK1-210ENST00000508473 DEFB128Q7Z7B8 93 aa27.5■■□□□ 1.99
SRPK1-210ENST00000508473 PLA2G4DQ86XP0 818 aa27.5■■□□□ 1.99
SRPK1-210ENST00000508473 CRYGNQ8WXF5 182 aa27.5■■□□□ 1.99
SRPK1-210ENST00000508473 SEPT1Q8WYJ6 367 aa27.5■■□□□ 1.99
SRPK1-210ENST00000508473 DHX38Q92620 1227 aaKnown RBP27.5■■□□□ 1.99
SRPK1-210ENST00000508473 AGO4Q9HCK5 861 aaKnown RBP27.5■■□□□ 1.99
SRPK1-210ENST00000508473 JPH1Q9HDC5 661 aaPredicted RBP27.5■■□□□ 1.99
SRPK1-210ENST00000508473 CYP3A4P08684 503 aa27.49■■□□□ 1.99
SRPK1-210ENST00000508473 SMIM10L2AP0DMW4 78 aa27.49■■□□□ 1.99
SRPK1-210ENST00000508473 SMIM10L2BP0DMW5 78 aa27.49■■□□□ 1.99
SRPK1-210ENST00000508473 ITGB3BPQ13352 177 aaPredicted RBP27.49■■□□□ 1.99
SRPK1-210ENST00000508473 ME3Q16798 604 aa27.49■■□□□ 1.99
SRPK1-210ENST00000508473 SDF4Q9BRK5 362 aa27.49■■□□□ 1.99
SRPK1-210ENST00000508473 ZNF215Q9UL58 517 aaPredicted RBP27.49■■□□□ 1.99
SRPK1-210ENST00000508473 C17orf102A2RUQ5 167 aa27.48■■□□□ 1.99
SRPK1-210ENST00000508473 PITPNM1O00562 1244 aa27.48■■□□□ 1.99
SRPK1-210ENST00000508473 CTDNEP1O95476 244 aa27.48■■□□□ 1.99
SRPK1-210ENST00000508473 FGBP02675 491 aa27.48■■□□□ 1.99
SRPK1-210ENST00000508473 IQCF3P0C7M6 154 aa27.48■■□□□ 1.99
SRPK1-210ENST00000508473 Q7L0L9 218 aa27.48■■□□□ 1.99
SRPK1-210ENST00000508473 RPUSD2Q8IZ73 545 aaKnown RBP27.48■■□□□ 1.99
SRPK1-210ENST00000508473 CCDC155Q8N6L0 562 aa27.48■■□□□ 1.99
SRPK1-210ENST00000508473 SLC9A2Q9UBY0 812 aa27.48■■□□□ 1.99
SRPK1-210ENST00000508473 PCDHA4Q9UN74 947 aa27.48■■□□□ 1.99
SRPK1-210ENST00000508473 DDX39AO00148 427 aaKnown RBP27.47■■□□□ 1.99
SRPK1-210ENST00000508473 PTK7Q13308 1070 aa27.47■■□□□ 1.99
SRPK1-210ENST00000508473 NIPA1Q7RTP0 329 aa27.47■■□□□ 1.99
SRPK1-210ENST00000508473 OTOP2Q7RTS6 562 aa27.47■■□□□ 1.99
SRPK1-210ENST00000508473 CAGE1Q8TC20 777 aa27.47■■□□□ 1.99
SRPK1-210ENST00000508473 WNT8BQ93098 351 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms