RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 NUP133Q8WUM0 1156 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 HDAC2Q92769 488 aaKnown RBP4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 KIAA1191Q96A73 305 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 TBC1D20Q96BZ9 403 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 C1GALT1C1Q96EU7 318 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 MVB12AQ96EY5 273 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 ZSCAN31Q96LW9 406 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 PPM1MQ96MI6 270 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 SEC62Q99442 399 aaKnown RBP4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 CENPOQ9BU64 300 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 WDR18Q9BV38 432 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 B3GNT5Q9BYG0 378 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 QRSL1Q9H0R6 528 aaKnown RBP4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 IFT122Q9HBG6 1241 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 GFOD1Q9NXC2 390 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 GPRC5BQ9NZH0 403 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 KCNG1Q9UIX4 513 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 GDF2Q9UK05 429 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 AP4E1Q9UPM8 1137 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 CRYL1Q9Y2S2 319 aa4.31□□□□□ -1.72
HMGB1P22-201ENST00000505315 RPGRIP1LQ68CZ1 1315 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 A0A0G2JS52 829 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 CAPN8A6NHC0 703 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 STXBP3O00186 592 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 FSCN2O14926 492 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 SHOXO15266 292 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 TGM5O43548 720 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 ORC4O43929 436 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 TUSC2O75896 110 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 CST3P01034 146 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 HRGP04196 525 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 CKMP06732 381 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 THBDP07204 575 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 CD3EP07766 207 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 THBS1P07996 1170 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 BMP1P13497 986 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 C5AR1P21730 350 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 KRT9P35527 623 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 ADH7P40394 386 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 PIK3CBP42338 1070 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 TM4SF4P48230 202 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 SEPHS1P49903 392 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 ADKP55263 362 aaKnown RBP4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 SRSF2Q01130 221 aaKnown RBP4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 CTBSQ01459 385 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 POU4F1Q01851 419 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 ALDH6A1Q02252 535 aaKnown RBP4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 DBN1Q16643 649 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 FAM133BQ5BKY9 247 aaKnown RBP4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 FAM209BQ5JX69 171 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 DACT2Q5SW24 774 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 VPS53Q5VIR6 699 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 PGBD2Q6P3X8 592 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 TLDC1Q6P9B6 456 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 OVCH1Q7RTY7 1134 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 DAAM2Q86T65 1068 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 CCDC33Q8N5R6 958 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 KIAA1958Q8N8K9 716 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 GIMAP8Q8ND71 665 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 LMBR1Q8WVP7 490 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 LRTOMTQ8WZ04 291 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 C1orf159Q96HA4 380 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 KREMEN1Q96MU8 473 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 KCNJ15Q99712 375 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 LPIN3Q9BQK8 851 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 ISCA1Q9BUE6 129 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 IPPKQ9H8X2 491 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 PIDD1Q9HB75 910 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 AGO4Q9HCK5 861 aaKnown RBP4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 PDLIM7Q9NR12 457 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 DISC1Q9NRI5 854 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 GPR27Q9NS67 375 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 IRAK4Q9NWZ3 460 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 IFT80Q9P2H3 777 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 NAGPAQ9UK23 515 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 EDARQ9UNE0 448 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 FRMD4BQ9Y2L6 1034 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 GPR52Q9Y2T5 361 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 SLC45A1Q9Y2W3 748 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 PCDHGB2Q9Y5G2 931 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 GPR45Q9Y5Y3 372 aa4.3□□□□□ -1.72
HMGB1P22-201ENST00000505315 SLC12A8A0AV02 714 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 LCHNA4D1U4 455 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 C2orf71A6NGG8 1288 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 FAM47E-STBD1D6RA91 191 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 H3BML4 177 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 NCAM2O15394 837 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 NCK2O43639 380 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 B3GALT2O43825 422 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 MSCO60682 206 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 NDUFS2O75306 463 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 TBC1D8O95759 1140 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 SCG5P05408 212 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 BMP4P12644 408 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 PDCP20941 246 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 HTR1BP28222 390 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 KRT20P35900 424 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 LTBRP36941 435 aa4.29□□□□□ -1.72
HMGB1P22-201ENST00000505315 IL6STP40189 918 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms