RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 KRIT1O00522 736 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 C6orf222P0C671 652 aaPredicted RBP7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 GNAT1P11488 350 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 RPL13P26373 211 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 BUD31P41223 144 aaPredicted RBP7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 PRR31Q5SQ13 230 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 TMC5Q6UXY8 1006 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 DPH6Q7L8W6 267 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 FRMD5Q7Z6J6 570 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 FERMT3Q86UX7 667 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 SCUBE1Q8IWY4 988 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 ADAMTS17Q8TE56 1095 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 DDX1Q92499 740 aaKnown RBP7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 USP40Q9NVE5 1235 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 TELO2Q9Y4R8 837 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 DUSP10Q9Y6W6 482 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 NCANO14594 1321 aa7.22□□□□□ -1.25
UBE2D3-218ENST00000505009 PRRG2O14669 202 aa7.21□□□□□ -1.26
UBE2D3-218ENST00000505009 TTLL6Q8N841 843 aa7.21□□□□□ -1.26
UBE2D3-218ENST00000505009 PMFBP1Q8TBY8 1022 aa7.21□□□□□ -1.26
UBE2D3-218ENST00000505009 PHOSPHO1Q8TCT1 267 aa7.21□□□□□ -1.26
UBE2D3-218ENST00000505009 TEPSINQ96N21 525 aa7.21□□□□□ -1.26
UBE2D3-218ENST00000505009 PCDH18Q9HCL0 1135 aa7.21□□□□□ -1.26
UBE2D3-218ENST00000505009 DDX3XO00571 662 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBE2D3-218ENST00000505009 GJA9P57773 515 aa7.2□□□□□ -1.26
UBE2D3-218ENST00000505009 TUSC3Q13454 348 aa7.2□□□□□ -1.26
UBE2D3-218ENST00000505009 HABP4Q5JVS0 413 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-218ENST00000505009 PHF19Q5T6S3 580 aa7.2□□□□□ -1.26
UBE2D3-218ENST00000505009 PROSER1Q86XN7 944 aa7.2□□□□□ -1.26
UBE2D3-218ENST00000505009 UHMK1Q8TAS1 419 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-218ENST00000505009 DNAJC7Q99615 494 aa7.2□□□□□ -1.26
UBE2D3-218ENST00000505009 NGRNQ9NPE2 291 aaKnown RBP7.2□□□□□ -1.26
UBE2D3-218ENST00000505009 TCRBV5S4A2TA0A5A2 114 aa7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 MAFKO60675 156 aa7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 SUMO1P63165 101 aaKnown RBP7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 SPIRE1Q08AE8 756 aa7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 RGL3Q3MIN7 710 aa7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 MCTP2Q6DN12 878 aa7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 CYP4F22Q6NT55 531 aa7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 LRP10Q7Z4F1 713 aa7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 CXorf38Q8TB03 319 aa7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 SH3RF2Q8TEC5 729 aa7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 SRPK1Q96SB4 655 aaKnown RBP7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 DNAJC2Q99543 621 aaKnown RBP7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 ALG1Q9BT22 464 aa7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 KRTAP4-9Q9BYQ8 210 aa7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 PCDHA8Q9Y5H6 950 aa7.19□□□□□ -1.26
UBE2D3-218ENST00000505009 FAM47E-STBD1D6RA91 191 aa7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 SYN1P17600 705 aa7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 CNR2P34972 360 aa7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 MLLT6P55198 1093 aaPredicted RBP7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 SKOR2Q2VWA4 1001 aaPredicted RBP7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 MTDHQ86UE4 582 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 TTLL11Q8NHH1 800 aa7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 PTPRN2Q92932 1015 aa7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 DHRS4Q9BTZ2 278 aa7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 CD244Q9BZW8 370 aa7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 LNPKQ9C0E8 428 aa7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 CROTQ9UKG9 612 aa7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 DSEQ9UL01 958 aa7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 MRPS23Q9Y3D9 190 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 PCDHA9Q9Y5H5 950 aa7.18□□□□□ -1.26
UBE2D3-218ENST00000505009 ZNF28P17035 718 aa7.17□□□□□ -1.26
UBE2D3-218ENST00000505009 MAMDC2Q7Z304 686 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-218ENST00000505009 TRIM48Q8IWZ4 208 aa7.17□□□□□ -1.26
UBE2D3-218ENST00000505009 TXNDC5Q8NBS9 432 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-218ENST00000505009 PCDH19Q8TAB3 1148 aa7.17□□□□□ -1.26
UBE2D3-218ENST00000505009 KISS1RQ969F8 398 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-218ENST00000505009 IPO9Q96P70 1041 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-218ENST00000505009 BDH2Q9BUT1 245 aa7.17□□□□□ -1.26
UBE2D3-218ENST00000505009 AQP7O14520 342 aa7.16□□□□□ -1.26
UBE2D3-218ENST00000505009 GUCY1A3Q02108 690 aa7.16□□□□□ -1.26
UBE2D3-218ENST00000505009 PAK1Q13153 545 aa7.16□□□□□ -1.26
UBE2D3-218ENST00000505009 PAN2Q504Q3 1202 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-218ENST00000505009 UBXN11Q5T124 520 aa7.16□□□□□ -1.26
UBE2D3-218ENST00000505009 PRAMEF18Q5VWM3 479 aa7.16□□□□□ -1.26
UBE2D3-218ENST00000505009 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.16□□□□□ -1.26
UBE2D3-218ENST00000505009 ZCCHC14Q8WYQ9 949 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-218ENST00000505009 CLIC6Q96NY7 704 aa7.16□□□□□ -1.26
UBE2D3-218ENST00000505009 ACOT7O00154 380 aa7.15□□□□□ -1.26
UBE2D3-218ENST00000505009 SRGAP2CP0DJJ0 459 aa7.15□□□□□ -1.26
UBE2D3-218ENST00000505009 PYGMP11217 842 aa7.15□□□□□ -1.26
UBE2D3-218ENST00000505009 FAHP16930 419 aa7.15□□□□□ -1.26
UBE2D3-218ENST00000505009 IL13P35225 146 aa7.15□□□□□ -1.26
UBE2D3-218ENST00000505009 LONRF2Q1L5Z9 754 aa7.15□□□□□ -1.26
UBE2D3-218ENST00000505009 ZFYVE27Q5T4F4 411 aa7.15□□□□□ -1.26
UBE2D3-218ENST00000505009 KCTD1Q719H9 257 aa7.15□□□□□ -1.26
UBE2D3-218ENST00000505009 TMEM209Q96SK2 561 aa7.15□□□□□ -1.26
UBE2D3-218ENST00000505009 SLC52A2Q9HAB3 445 aa7.15□□□□□ -1.26
UBE2D3-218ENST00000505009 HSPBP1Q9NZL4 362 aa7.15□□□□□ -1.26
UBE2D3-218ENST00000505009 CBLCQ9ULV8 474 aa7.15□□□□□ -1.26
UBE2D3-218ENST00000505009 ARVCFO00192 962 aa7.14□□□□□ -1.27
UBE2D3-218ENST00000505009 CRTAMO95727 393 aa7.14□□□□□ -1.27
UBE2D3-218ENST00000505009 AMY2AP04746 511 aa7.14□□□□□ -1.27
UBE2D3-218ENST00000505009 AMY2BP19961 511 aa7.14□□□□□ -1.27
UBE2D3-218ENST00000505009 EPHA5P54756 1037 aa7.14□□□□□ -1.27
UBE2D3-218ENST00000505009 GABREP78334 506 aa7.14□□□□□ -1.27
UBE2D3-218ENST00000505009 ZC3H12BQ5HYM0 836 aaKnown RBP7.14□□□□□ -1.27
UBE2D3-218ENST00000505009 FAM26FQ5R3K3 315 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms