RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 DYNLL2Q96FJ2 89 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 CDK5RAP3Q96JB5 506 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 GPR101Q96P66 508 aaPredicted RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 PRMT1Q99873 361 aaKnown RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 ABCF3Q9NUQ8 709 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 BIN2Q9UBW5 565 aaPredicted RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 NR2E1Q9Y466 385 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 USP17L3A6NCW0 530 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 USP17L4A6NCW7 530 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 POTEMA6NI47 508 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 TRAPPC3O43617 180 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 PDHA1P08559 390 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 CHN1P15882 459 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 PLTPP55058 493 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 EIF6P56537 245 aaKnown RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 FUT2Q10981 343 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 TMTC3Q6ZXV5 915 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 USP17L1Q7RTZ2 530 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 AGAP11Q8TF27 550 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 PURBQ96QR8 312 aaKnown RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 TRIM9Q9C026 710 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 TAF1DQ9H5J8 278 aaPredicted RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 GDF3Q9NR23 364 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 SLAIN2Q9P270 581 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 DBR1Q9UK59 544 aaKnown RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 MRC1P22897 1456 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 TMEM110-MUSTN1A8MSY1 372 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 CSF1RP07333 972 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 MMEP08473 750 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 BYSLQ13895 437 aaKnown RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 SLC9C1Q4G0N8 1177 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 SFMBT2Q5VUG0 894 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 AADACL2Q6P093 401 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 C6orf89Q6UWU4 347 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 DZIP1Q86YF9 867 aaKnown RBP8.35□□□□□ -1.07
NEDD9-208ENST00000504387 LRRC34Q8IZ02 419 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 ARFGAP2Q8N6H7 521 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 SLC44A5Q8NCS7 719 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 GDAP1Q8TB36 358 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 UBA5Q9GZZ9 404 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 SNX24Q9Y343 169 aa8.35□□□□□ -1.07
NEDD9-208ENST00000504387 MYO5AQ9Y4I1 1855 aaKnown RBP8.34□□□□□ -1.07
NEDD9-208ENST00000504387 NPHP3-ACAD11A0A0J9YXS1 232 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 H0Y3Z8 333 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 TLR2O60603 784 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 TRIM37O94972 964 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 TNNC1P63316 161 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 LMBR1Q8WVP7 490 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 TNFRSF25Q93038 417 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 SLC4A9Q96Q91 983 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 PAIP2Q9BPZ3 127 aaKnown RBP8.34□□□□□ -1.07
NEDD9-208ENST00000504387 ARHGEF10LQ9HCE6 1279 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 TMEM260Q9NX78 707 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 AGAP1Q9UPQ3 857 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 KDM3BQ7LBC6 1761 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 CNTNAP5Q8WYK1 1306 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 GRID2IPA4D2P6 1211 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 SPDYE3A6NKU9 549 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 F8W031 263 aaPredicted RBP8.34□□□□□ -1.07
NEDD9-208ENST00000504387 BMP15O95972 392 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 KRT13P13646 458 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 ARID4AP29374 1257 aaPredicted RBP8.34□□□□□ -1.07
NEDD9-208ENST00000504387 FAM83BQ5T0W9 1011 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 SEPT14Q6ZU15 432 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 CCDC197Q8NCU1 140 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 CUL5Q93034 780 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 FGFBP2Q9BYJ0 223 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 AZI2Q9H6S1 392 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 ANKIB1Q9P2G1 1089 aa8.34□□□□□ -1.07
NEDD9-208ENST00000504387 AFDNP55196 1824 aaKnown RBP8.34□□□□□ -1.08
NEDD9-208ENST00000504387 BICDL2A1A5D9 508 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 MYMKA6NI61 221 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 RHOBTB3O94955 611 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 USP17L8P0C7I0 530 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 CYP19A1P11511 503 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 KLRK1P26718 216 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 LONP1P36776 959 aaKnown RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 MAP2K1Q02750 393 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 DCAF17Q5H9S7 520 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 GJB7Q6PEY0 223 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 FAM114A1Q8IWE2 563 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 USP38Q8NB14 1042 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 SPDYE1Q8NFV5 336 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 CALR3Q96L12 384 aaKnown RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 SPAG5Q96R06 1193 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 NUDT12Q9BQG2 462 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 KCNK9Q9NPC2 374 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 PNMA3Q9UL41 463 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 PTPN22Q9Y2R2 807 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 RTCBQ9Y3I0 505 aaKnown RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 MROH5Q6ZUA9 1318 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 MPHOSPH10O00566 681 aaKnown RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 PPP1R12AO14974 1030 aaPredicted RBP8.33□□□□□ -1.08
NEDD9-208ENST00000504387 EVI5O60447 810 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 UBOX5O94941 541 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 SESN3P58005 492 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 TFAP4Q01664 338 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 KCNMA1Q12791 1236 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 TNIP1Q15025 636 aa8.33□□□□□ -1.08
NEDD9-208ENST00000504387 ERICH1Q86X53 443 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms