RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 TARBP2Q15633 366 aaKnown RBP8.53□□□□□ -1.04
UBE2D3-217ENST00000504211 TMEM177Q53S58 311 aa8.53□□□□□ -1.04
UBE2D3-217ENST00000504211 FIGNQ5HY92 759 aa8.53□□□□□ -1.04
UBE2D3-217ENST00000504211 TMEM132EQ6IEE7 984 aa8.53□□□□□ -1.04
UBE2D3-217ENST00000504211 SYDE1Q6ZW31 735 aaPredicted RBP8.53□□□□□ -1.04
UBE2D3-217ENST00000504211 ANKLE2Q86XL3 938 aa8.53□□□□□ -1.04
UBE2D3-217ENST00000504211 IGDCC3Q8IVU1 814 aa8.53□□□□□ -1.04
UBE2D3-217ENST00000504211 SGPP1Q9BX95 441 aa8.53□□□□□ -1.04
UBE2D3-217ENST00000504211 SMURF1Q9HCE7 757 aa8.53□□□□□ -1.04
UBE2D3-217ENST00000504211 MAN2B1O00754 1011 aa8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 SLC27A2O14975 620 aa8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 GLRX3O76003 335 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 JMJD7P0C870 316 aa8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 NCAM1P13591 858 aa8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 MECP2P51608 486 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 HHIPL2Q6UWX4 724 aa8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 ETV3LQ6ZN32 361 aa8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 ARHGAP36Q6ZRI8 547 aa8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 ARRDC4Q8NCT1 418 aa8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 DDX1Q92499 740 aaKnown RBP8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 KCNN1Q92952 543 aa8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 ORAI3Q9BRQ5 295 aa8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 SAMD15Q9P1V8 674 aa8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 TELO2Q9Y4R8 837 aa8.52□□□□□ -1.05
UBE2D3-217ENST00000504211 A0A087X0B3 334 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 TSPAN15O95858 294 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 PFKLP17858 780 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 JAM2P57087 298 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 TUSC3Q13454 348 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 ZNF648Q5T619 568 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 KCTD1Q719H9 257 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 OSTM1Q86WC4 334 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 PTRH1Q86Y79 214 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 NLGN4XQ8N0W4 816 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 PPM1KQ8N3J5 372 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 CISD2Q8N5K1 135 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 TARS2Q9BW92 718 aaKnown RBP8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 CD244Q9BZW8 370 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 TMX1Q9H3N1 280 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 DTLQ9NZJ0 730 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 HSPBP1Q9NZL4 362 aa8.51□□□□□ -1.05
UBE2D3-217ENST00000504211 GSG1L2A8MUP6 293 aa8.5□□□□□ -1.05
UBE2D3-217ENST00000504211 CACNB2Q08289 660 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-217ENST00000504211 CDCA2Q69YH5 1023 aaPredicted RBP8.5□□□□□ -1.05
UBE2D3-217ENST00000504211 OTOP1Q7RTM1 612 aa8.5□□□□□ -1.05
UBE2D3-217ENST00000504211 CLEC4DQ8WXI8 215 aa8.5□□□□□ -1.05
UBE2D3-217ENST00000504211 SLC38A3Q99624 504 aa8.5□□□□□ -1.05
UBE2D3-217ENST00000504211 CD320Q9NPF0 282 aa8.5□□□□□ -1.05
UBE2D3-217ENST00000504211 M0R2C6 588 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 CBX4O00257 560 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 TMEM253P0C7T8 217 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 ATF2P15336 505 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 TXKP42681 527 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 NCKAP1LP55160 1127 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 PIK3R6Q5UE93 754 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 UBE2R2Q712K3 238 aaPredicted RBP8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 B3GNT8Q7Z7M8 397 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 NOSTRINQ8IVI9 506 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 CHST14Q8NCH0 376 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 SIGLEC10Q96LC7 697 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 NGRNQ9NPE2 291 aaKnown RBP8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 MAPRE3Q9UPY8 281 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 PRKAB1Q9Y478 270 aa8.49□□□□□ -1.05
UBE2D3-217ENST00000504211 NFIBO00712 420 aa8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 BUB1BO60566 1050 aaPredicted RBP8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 CLASP2O75122 1294 aaKnown RBP8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 LTFP02788 710 aa8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 C8BP07358 591 aa8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 KRT15P19012 456 aa8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 MC3RP41968 323 aa8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 CFAP100Q494V2 611 aa8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 CNNM4Q6P4Q7 775 aa8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 THNSL2Q86YJ6 484 aa8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 RBM12BQ8IXT5 1001 aaKnown RBP8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 TOE1Q96GM8 510 aaKnown RBP8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 MTFR1LQ9H019 292 aa8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 ATP23Q9Y6H3 246 aa8.48□□□□□ -1.05
UBE2D3-217ENST00000504211 TRAF5O00463 557 aa8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 PDE8AO60658 829 aa8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 MYCLP1P12525 358 aaPredicted RBP8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 GJA4P35212 333 aa8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 MASP1P48740 699 aa8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 ARHGAP44Q17R89 818 aa8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 CR1LQ2VPA4 569 aa8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 TEPPQ6URK8 271 aa8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 ATG14Q6ZNE5 492 aa8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 ZC3H18Q86VM9 953 aaKnown RBP8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 KIF18BQ86Y91 864 aa8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 AHI1Q8N157 1196 aa8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 WNK4Q96J92 1243 aa8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 YIPF4Q9BSR8 244 aa8.47□□□□□ -1.05
UBE2D3-217ENST00000504211 LOC105371045A0A1W2PR82 267 aa8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 SLC12A8A0AV02 714 aa8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 KPNA6O60684 536 aa8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 LRG1P02750 347 aa8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 VIL1P09327 827 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 C1QTNF9P0C862 333 aa8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 PTPN1P18031 435 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 STAT5AP42229 794 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms