RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ICAM3P32942 547 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 TRIM32Q13049 653 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 TAPT1Q6NXT6 567 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 USP49Q70CQ1 688 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 OTOP1Q7RTM1 612 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 SDF4Q9BRK5 362 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 UNC45AQ9H3U1 944 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 ABHD16BQ9H3Z7 469 aa21.85■■□□□ 1.09
USP39-218ENST00000493829 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.84■■□□□ 1.09
USP39-218ENST00000493829 GNRH1P01148 92 aa21.84■■□□□ 1.09
USP39-218ENST00000493829 TXNP10599 105 aaKnown RBP21.84■■□□□ 1.09
USP39-218ENST00000493829 HSPA8P11142 646 aaKnown RBP21.84■■□□□ 1.09
USP39-218ENST00000493829 FXR2P51116 673 aaKnown RBP eCLIP21.84■■□□□ 1.09
USP39-218ENST00000493829 GJC2Q5T442 439 aaPredicted RBP21.84■■□□□ 1.09
USP39-218ENST00000493829 FSIP1Q8NA03 581 aa21.84■■□□□ 1.09
USP39-218ENST00000493829 SCFD2Q8WU76 684 aa21.84■■□□□ 1.09
USP39-218ENST00000493829 SYMPKQ92797 1274 aaKnown RBP21.84■■□□□ 1.09
USP39-218ENST00000493829 COPS5Q92905 334 aa21.84■■□□□ 1.09
USP39-218ENST00000493829 EPSTI1Q96J88 318 aa21.84■■□□□ 1.09
USP39-218ENST00000493829 GOLPH3LQ9H4A5 285 aa21.84■■□□□ 1.09
USP39-218ENST00000493829 LRWD1Q9UFC0 647 aa21.84■■□□□ 1.09
USP39-218ENST00000493829 DHX15O43143 795 aaKnown RBP21.83■■□□□ 1.09
USP39-218ENST00000493829 ADCY3O60266 1144 aa21.83■■□□□ 1.09
USP39-218ENST00000493829 LONP1P36776 959 aaKnown RBP21.83■■□□□ 1.09
USP39-218ENST00000493829 UBE2HP62256 183 aa21.83■■□□□ 1.09
USP39-218ENST00000493829 SPIRE1Q08AE8 756 aa21.83■■□□□ 1.09
USP39-218ENST00000493829 TTLL4Q14679 1199 aa21.83■■□□□ 1.09
USP39-218ENST00000493829 ZRSR1Q15695 479 aaKnown RBP21.83■■□□□ 1.09
USP39-218ENST00000493829 MFSD14CQ5VZR4 134 aa21.83■■□□□ 1.09
USP39-218ENST00000493829 ADALQ6DHV7 355 aa21.83■■□□□ 1.09
USP39-218ENST00000493829 CYFIP1Q7L576 1253 aa21.83■■□□□ 1.09
USP39-218ENST00000493829 RIT2Q99578 217 aa21.83■■□□□ 1.09
USP39-218ENST00000493829 TELO2Q9Y4R8 837 aa21.83■■□□□ 1.09
USP39-218ENST00000493829 A0A1B0GVL5 298 aa21.82■■□□□ 1.08
USP39-218ENST00000493829 MAFGO15525 162 aa21.82■■□□□ 1.08
USP39-218ENST00000493829 GGPS1O95749 300 aa21.82■■□□□ 1.08
USP39-218ENST00000493829 IRF5Q13568 498 aa21.82■■□□□ 1.08
USP39-218ENST00000493829 CCDC144BQ3MJ40 725 aa21.82■■□□□ 1.08
USP39-218ENST00000493829 IGSF22Q8N9C0 903 aa21.82■■□□□ 1.08
USP39-218ENST00000493829 LENG1Q96BZ8 264 aaPredicted RBP21.82■■□□□ 1.08
USP39-218ENST00000493829 RAB34Q9BZG1 259 aa21.82■■□□□ 1.08
USP39-218ENST00000493829 JPH1Q9HDC5 661 aaPredicted RBP21.82■■□□□ 1.08
USP39-218ENST00000493829 TBC1D22BQ9NU19 505 aa21.82■■□□□ 1.08
USP39-218ENST00000493829 TCEAL9Q9UHQ7 104 aa21.82■■□□□ 1.08
USP39-218ENST00000493829 PTCH2Q9Y6C5 1203 aa21.82■■□□□ 1.08
USP39-218ENST00000493829 EML1O00423 815 aa21.82■■□□□ 1.08
USP39-218ENST00000493829 RESP18Q5W5W9 173 aa21.82■■□□□ 1.08
USP39-218ENST00000493829 MRPS27Q92552 414 aaKnown RBP21.82■■□□□ 1.08
USP39-218ENST00000493829 DDX41Q9UJV9 622 aaKnown RBP21.82■■□□□ 1.08
USP39-218ENST00000493829 ADCY6O43306 1168 aa21.81■■□□□ 1.08
USP39-218ENST00000493829 CCNE2O96020 404 aa21.81■■□□□ 1.08
USP39-218ENST00000493829 IGHA2P01877 340 aa21.81■■□□□ 1.08
USP39-218ENST00000493829 ZNF865P0CJ78 1059 aaPredicted RBP21.81■■□□□ 1.08
USP39-218ENST00000493829 PFKFB1P16118 471 aa21.81■■□□□ 1.08
USP39-218ENST00000493829 LBX1P52954 281 aa21.81■■□□□ 1.08
USP39-218ENST00000493829 CCDC62Q6P9F0 684 aa21.81■■□□□ 1.08
USP39-218ENST00000493829 ZNF579Q8NAF0 562 aaKnown RBP21.81■■□□□ 1.08
USP39-218ENST00000493829 TRPV1Q8NER1 839 aa21.81■■□□□ 1.08
USP39-218ENST00000493829 RASSF8Q8NHQ8 419 aa21.81■■□□□ 1.08
USP39-218ENST00000493829 PLIN2Q99541 437 aa21.81■■□□□ 1.08
USP39-218ENST00000493829 SAMM50Q9Y512 469 aa21.81■■□□□ 1.08
USP39-218ENST00000493829 A0A1W2PQ27 194 aa21.8■■□□□ 1.08
USP39-218ENST00000493829 A0A1W2PQ64 194 aa21.8■■□□□ 1.08
USP39-218ENST00000493829 A0A1W2PQD8 194 aa21.8■■□□□ 1.08
USP39-218ENST00000493829 SMPD1P17405 629 aa21.8■■□□□ 1.08
USP39-218ENST00000493829 LIG1P18858 919 aa21.8■■□□□ 1.08
USP39-218ENST00000493829 PPP2R5CQ13362 524 aa21.8■■□□□ 1.08
USP39-218ENST00000493829 KCNV1Q6PIU1 500 aa21.8■■□□□ 1.08
USP39-218ENST00000493829 SNX29Q8TEQ0 813 aa21.8■■□□□ 1.08
USP39-218ENST00000493829 PANK2Q9BZ23 570 aa21.8■■□□□ 1.08
USP39-218ENST00000493829 SLC9A2Q9UBY0 812 aa21.8■■□□□ 1.08
USP39-218ENST00000493829 NFASCO94856 1347 aa21.8■■□□□ 1.08
USP39-218ENST00000493829 FARP2O94887 1054 aaPredicted RBP21.79■■□□□ 1.08
USP39-218ENST00000493829 PRKAR2AP13861 404 aaKnown RBP21.79■■□□□ 1.08
USP39-218ENST00000493829 CMA1P23946 247 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 CNGA1P29973 690 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 NDUFA8P51970 172 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 NEDD9Q14511 834 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 MIER3Q7Z3K6 550 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 CABP7Q86V35 215 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 TRMT44Q8IYL2 757 aaKnown RBP21.79■■□□□ 1.08
USP39-218ENST00000493829 PDILTQ8N807 584 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 GPT2Q8TD30 523 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 MLXIPQ9HAP2 919 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 FAM13BQ9NYF5 915 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 HTTP42858 3142 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 RBM47A0AV96 593 aaKnown RBP21.79■■□□□ 1.08
USP39-218ENST00000493829 HMGCRP04035 888 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 TGFB3P10600 412 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 CYBAP13498 195 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 TXLNAP40222 546 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 UBA7P41226 1012 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 KRT76Q01546 638 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 CYP4A11Q02928 519 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 CACNB2Q08289 660 aaPredicted RBP21.79■■□□□ 1.08
USP39-218ENST00000493829 KARSQ15046 597 aaKnown RBP21.79■■□□□ 1.08
USP39-218ENST00000493829 CCDC73Q6ZRK6 1079 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 DHX37Q8IY37 1157 aaKnown RBP21.79■■□□□ 1.08
USP39-218ENST00000493829 AK8Q96MA6 479 aa21.79■■□□□ 1.08
USP39-218ENST00000493829 SENP7Q9BQF6 1050 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms