RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 DDX42Q86XP3 938 aaKnown RBP eCLIP5.49□□□□□ -1.53
CLK1-213ENST00000492793 TTC1Q99614 292 aa5.49□□□□□ -1.53
CLK1-213ENST00000492793 BCAS3Q9H6U6 928 aa5.49□□□□□ -1.53
CLK1-213ENST00000492793 RIC8BQ9NVN3 520 aa5.49□□□□□ -1.53
CLK1-213ENST00000492793 MYOTQ9UBF9 498 aa5.49□□□□□ -1.53
CLK1-213ENST00000492793 ATP8A1Q9Y2Q0 1164 aa5.49□□□□□ -1.53
CLK1-213ENST00000492793 H7C1D1 291 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 ZNF561-AS1K7EIQ3 104 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 TRAF5O00463 557 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 SGSM2O43147 1006 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 SRGAP3O43295 1099 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 HSP90B1P14625 803 aaKnown RBP5.48□□□□□ -1.53
CLK1-213ENST00000492793 SLC6A11P48066 632 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 KPNA1P52294 538 aaPredicted RBP5.48□□□□□ -1.53
CLK1-213ENST00000492793 ERVFRD-1P60508 538 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 LACTBP83111 547 aaPredicted RBP5.48□□□□□ -1.53
CLK1-213ENST00000492793 PRR5P85299 388 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 TMPRSS15P98073 1019 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 IRF9Q00978 393 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 GRIN1Q05586 938 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 ZNF174Q15697 407 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 CPZQ66K79 652 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 TMEM132EQ6IEE7 984 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 ZC3H14Q6PJT7 736 aaKnown RBP5.48□□□□□ -1.53
CLK1-213ENST00000492793 RPTNQ6XPR3 784 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 ZNF605Q86T29 641 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 C11orf74Q86VG3 221 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 ANKLE2Q86XL3 938 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 NLGN4XQ8N0W4 816 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 WDR66Q8TBY9 1149 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 CHTF18Q8WVB6 975 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 FAM168AQ92567 244 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 ALG3Q92685 438 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 BRINP2Q9C0B6 783 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 SMOC1Q9H4F8 434 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 PCIF1Q9H4Z3 704 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 B4GALT6Q9UBX8 382 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 HCFC2Q9Y5Z7 792 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 ATP23Q9Y6H3 246 aa5.48□□□□□ -1.53
CLK1-213ENST00000492793 TCRBV5S4A2TA0A5A2 114 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 ZBTB7AO95365 584 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 F2P00734 622 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 LTFP02788 710 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 AMY2AP04746 511 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 AMY2BP19961 511 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 OCRLQ01968 901 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 TUSC3Q13454 348 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 TMEM132BQ14DG7 1078 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 DHCR24Q15392 516 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 BTBD8Q5XKL5 378 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 OLFML2BQ68BL8 750 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 KCTD1Q719H9 257 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 CBLL1Q75N03 491 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 TMC6Q7Z403 805 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.47□□□□□ -1.53
CLK1-213ENST00000492793 TRIM48Q8IWZ4 208 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 UHMK1Q8TAS1 419 aaKnown RBP5.47□□□□□ -1.53
CLK1-213ENST00000492793 DDX11Q96FC9 970 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 LIN37Q96GY3 246 aaPredicted RBP5.47□□□□□ -1.53
CLK1-213ENST00000492793 DIRC2Q96SL1 478 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 BOCQ9BWV1 1114 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 IFT22Q9H7X7 185 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 SMURF1Q9HCE7 757 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 SRPK3Q9UPE1 567 aa5.47□□□□□ -1.53
CLK1-213ENST00000492793 PRAMEF25A6NGN4 478 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 MAN2B1O00754 1011 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 FKBP9O95302 570 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 ATP2A2P16615 1042 aaKnown RBP5.46□□□□□ -1.54
CLK1-213ENST00000492793 CDK11BP21127 795 aaKnown RBP5.46□□□□□ -1.54
CLK1-213ENST00000492793 ID4P47928 161 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 MAPKAPK2P49137 400 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 PLEKHN1Q494U1 663 aaPredicted RBP5.46□□□□□ -1.54
CLK1-213ENST00000492793 FIGNQ5HY92 759 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 EMC4Q5J8M3 183 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 FKBP9P1Q75LS8 142 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 KIF18BQ86Y91 864 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 PASD1Q8IV76 773 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 Q8N3U1 123 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 AFAP1L2Q8N4X5 818 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 PRPF38AQ8NAV1 312 aaKnown RBP5.46□□□□□ -1.54
CLK1-213ENST00000492793 ARRDC4Q8NCT1 418 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 SMC1BQ8NDV3 1235 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 PHOSPHO1Q8TCT1 267 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 SH3RF2Q8TEC5 729 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 HOMER2Q9NSB8 354 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 KLHL14Q9P2G3 628 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 ASH2LQ9UBL3 628 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 ZNF652Q9Y2D9 606 aa5.46□□□□□ -1.54
CLK1-213ENST00000492793 TCRBV5S2A0A599 114 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 NEMP1O14524 444 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 ABLIM1O14639 778 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 BRINP1O60477 761 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 TADA3O75528 432 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 PAPLNO95428 1278 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 SLC9A1P19634 815 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 ADCYAP1R1P41586 468 aa5.45□□□□□ -1.54
CLK1-213ENST00000492793 CDKN1CP49918 316 aaPredicted RBP5.45□□□□□ -1.54
CLK1-213ENST00000492793 MECP2P51608 486 aaKnown RBP5.45□□□□□ -1.54
CLK1-213ENST00000492793 KIF11P52732 1056 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms