RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 DTWD1Q8N5C7 304 aa6.62□□□□□ -1.35
PTPN4-210ENST00000485247 EDEM1Q92611 657 aa6.62□□□□□ -1.35
PTPN4-210ENST00000485247 KAZALD1Q96I82 304 aa6.62□□□□□ -1.35
PTPN4-210ENST00000485247 TOX2Q96NM4 488 aa6.62□□□□□ -1.35
PTPN4-210ENST00000485247 CERS4Q9HA82 394 aa6.62□□□□□ -1.35
PTPN4-210ENST00000485247 XPNPEP3Q9NQH7 507 aa6.62□□□□□ -1.35
PTPN4-210ENST00000485247 TBX21Q9UL17 535 aa6.62□□□□□ -1.35
PTPN4-210ENST00000485247 TRIM33Q9UPN9 1127 aa6.62□□□□□ -1.35
PTPN4-210ENST00000485247 RABGAP1Q9Y3P9 1069 aa6.62□□□□□ -1.35
PTPN4-210ENST00000485247 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.62□□□□□ -1.35
PTPN4-210ENST00000485247 CHD9Q3L8U1 2897 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 APAF1O14727 1248 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 ASNSP08243 561 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 RARBP10826 455 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 ALADP13716 330 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 ADORA2AP29274 412 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 ATP11AP98196 1134 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 ZYXQ15942 572 aaKnown RBP6.61□□□□□ -1.35
PTPN4-210ENST00000485247 OLFML2BQ68BL8 750 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 GDF6Q6KF10 455 aaPredicted RBP6.61□□□□□ -1.35
PTPN4-210ENST00000485247 OTOP2Q7RTS6 562 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 RNF180Q86T96 592 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 GJD3Q8N144 294 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 TMEM199Q8N511 208 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 ANKS1AQ92625 1134 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 KCNH6Q9H252 994 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 STARD7Q9NQZ5 370 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 BTBD7Q9P203 1132 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 FNDC3AQ9Y2H6 1198 aaKnown RBP6.61□□□□□ -1.35
PTPN4-210ENST00000485247 ATAD5Q96QE3 1844 aa6.61□□□□□ -1.35
PTPN4-210ENST00000485247 PRRC2BQ5JSZ5 2229 aaKnown RBP6.61□□□□□ -1.35
PTPN4-210ENST00000485247 REV3LO60673 3130 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 ZNF521Q96K83 1311 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 SALL1Q9NSC2 1324 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 A6NHS1 94 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 COBLO75128 1261 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 KIF4AO95239 1232 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 FGBP02675 491 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 PDGFAP04085 211 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 POU3F3P20264 500 aaPredicted RBP6.6□□□□□ -1.35
PTPN4-210ENST00000485247 CYP2C18P33260 490 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 EIF1AXP47813 144 aaKnown RBP6.6□□□□□ -1.35
PTPN4-210ENST00000485247 ACLYP53396 1101 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 RHBDL3P58872 404 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 CCER1Q8TC90 406 aaPredicted RBP6.6□□□□□ -1.35
PTPN4-210ENST00000485247 LPIN2Q92539 896 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 MTIF3Q9H2K0 278 aaKnown RBP6.6□□□□□ -1.35
PTPN4-210ENST00000485247 BICC1Q9H694 974 aaKnown RBP6.6□□□□□ -1.35
PTPN4-210ENST00000485247 GNL3LQ9NVN8 582 aaKnown RBP6.6□□□□□ -1.35
PTPN4-210ENST00000485247 ABI2Q9NYB9 513 aaPredicted RBP6.6□□□□□ -1.35
PTPN4-210ENST00000485247 CNTN3Q9P232 1028 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 ABCF2Q9UG63 623 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 MYH2Q9UKX2 1941 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 MYH13Q9UKX3 1938 aa6.6□□□□□ -1.35
PTPN4-210ENST00000485247 MROH7-TTC4A0A0A0MT08 1334 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 GPR75-ASB3A0A0A6YYF3 556 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 EPOPA6NHQ4 379 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 NBPF7P0C2Y1 421 aaPredicted RBP6.59□□□□□ -1.35
PTPN4-210ENST00000485247 PHKA1P46020 1223 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 DNM1Q05193 864 aaKnown RBP6.59□□□□□ -1.35
PTPN4-210ENST00000485247 HYAL2Q12891 473 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 TTC39BQ5VTQ0 682 aaPredicted RBP6.59□□□□□ -1.35
PTPN4-210ENST00000485247 PDE12Q6L8Q7 609 aaKnown RBP6.59□□□□□ -1.35
PTPN4-210ENST00000485247 SLC4A10Q6U841 1118 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 CATSPERGQ6ZRH7 1159 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 ZGPATQ8N5A5 531 aaKnown RBP6.59□□□□□ -1.35
PTPN4-210ENST00000485247 IL22RA1Q8N6P7 574 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 NUP133Q8WUM0 1156 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 FEZ1Q99689 392 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 IL23AQ9NPF7 189 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 HERC5Q9UII4 1024 aaKnown RBP6.59□□□□□ -1.35
PTPN4-210ENST00000485247 DENND2AQ9ULE3 1009 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 PCDHA11Q9Y5I1 949 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 SLC4A7Q9Y6M7 1214 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 GBF1Q92538 1859 aa6.59□□□□□ -1.35
PTPN4-210ENST00000485247 DYRK3O43781 588 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 STRNO43815 780 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 ALDH1L1O75891 902 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 CA3P07451 260 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 NPR3P17342 541 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 TAL1P17542 331 aaPredicted RBP6.58□□□□□ -1.36
PTPN4-210ENST00000485247 ERCC3P19447 782 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 NRG1Q02297 640 aaPredicted RBP6.58□□□□□ -1.36
PTPN4-210ENST00000485247 KCNA10Q16322 511 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 RABL6Q3YEC7 729 aaPredicted RBP6.58□□□□□ -1.36
PTPN4-210ENST00000485247 ZNF438Q7Z4V0 828 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 FAM178BQ8IXR5 827 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 CRACR2BQ8N4Y2 399 aaPredicted RBP6.58□□□□□ -1.36
PTPN4-210ENST00000485247 ANKRD44Q8N8A2 993 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 ARNTL2Q8WYA1 636 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 MAML3Q96JK9 1138 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 SSBP4Q9BWG4 385 aaPredicted RBP6.58□□□□□ -1.36
PTPN4-210ENST00000485247 MOV10L1Q9BXT6 1211 aaKnown RBP6.58□□□□□ -1.36
PTPN4-210ENST00000485247 SRCIN1Q9C0H9 1055 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 RBSNQ9H1K0 784 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 RASSF4Q9H2L5 321 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 SLC5A4Q9NY91 659 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 KANSL3Q9P2N6 904 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 PI4KBQ9UBF8 816 aa6.58□□□□□ -1.36
PTPN4-210ENST00000485247 ZBTB21Q9ULJ3 1066 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms