RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 EXOC7Q9UPT5 735 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 STK24Q9Y6E0 443 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 ZHX2Q9Y6X8 837 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 POTEFA5A3E0 1075 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 SPOPO43791 374 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 POTEIP0CG38 1075 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 PDHBP11177 359 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 GUCY2FP51841 1108 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 ZNF543Q08ER8 600 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 GRIK5Q16478 980 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 TMED8Q6PL24 325 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-218ENST00000482171 POTEGQ6S5H5 508 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 POTEEQ6S8J3 1075 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 KRT26Q7Z3Y9 468 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 TSGA10Q9BZW7 698 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 TRIM31Q9BZY9 425 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 MAGEF1Q9HAY2 307 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 AKAP12Q02952 1782 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 LRRIQ4A6NIV6 560 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 CEP104O60308 925 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 DKC1O60832 514 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMPD4-218ENST00000482171 NDUFB10O96000 172 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 KLHL7Q8IXQ5 586 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 DCAF4Q8WV16 495 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 RSRC1Q96IZ7 334 aaKnown RBP12.39□□□□□ -0.43
SMPD4-218ENST00000482171 CTTNBP2NLQ9P2B4 639 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 MYO1AQ9UBC5 1043 aa12.39□□□□□ -0.43
SMPD4-218ENST00000482171 EEF1GP26641 437 aaKnown RBP12.38□□□□□ -0.43
SMPD4-218ENST00000482171 TNNC1P63316 161 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 DDR1Q08345 913 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 TOGARAM2Q6ZUX3 1019 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 CCDC155Q8N6L0 562 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 EIF3CLB5ME19 914 aaKnown RBP12.38□□□□□ -0.43
SMPD4-218ENST00000482171 EVX2Q03828 476 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 SLC15A2Q16348 729 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 OTUD6AQ7L8S5 288 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 IFT20Q8IY31 132 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 BANK1Q8NDB2 785 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 DEPTORQ8TB45 409 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 EIF3CQ99613 913 aaKnown RBP12.38□□□□□ -0.43
SMPD4-218ENST00000482171 SH2D3AQ9BRG2 576 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 BAIAP2L1Q9UHR4 511 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 ANAPC4Q9UJX5 808 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 LTN1O94822 1766 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 SRGNP10124 158 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 FCER1AP12319 257 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 DPEP1P16444 411 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 STAT1P42224 750 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 RASA3Q14644 834 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 NTRK3Q16288 839 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 EFCAB13Q8IY85 973 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 PPM1KQ8N3J5 372 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 SPZ1Q9BXG8 430 aa12.38□□□□□ -0.43
SMPD4-218ENST00000482171 KRT19P08727 400 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 IGBP1P78318 339 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 FMR1Q06787 632 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMPD4-218ENST00000482171 EXOC3L4Q17RC7 722 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 PAIP2Q9BPZ3 127 aaKnown RBP12.37□□□□□ -0.43
SMPD4-218ENST00000482171 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-218ENST00000482171 SEPT9Q9UHD8 586 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-218ENST00000482171 A0A087WUV0 522 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-218ENST00000482171 PSMD14O00487 310 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 GNA14O95837 355 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 SEC23AQ15436 765 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 TCP11X2Q5H9J9 407 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 AGXT2Q9BYV1 514 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 TMEM39BQ9GZU3 492 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 HAUS4Q9H6D7 363 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-218ENST00000482171 VIMP08670 466 aaKnown RBP12.37□□□□□ -0.43
SMPD4-218ENST00000482171 MAGEA9P43362 315 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 PPP4CP60510 307 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 SUPT20HL1Q3ZLR7 823 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 CEP85LQ5SZL2 805 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 ENGASEQ8NFI3 743 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 WDR24Q96S15 920 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 IRX2Q9BZI1 471 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-218ENST00000482171 TADA3O75528 432 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 NEBLO76041 1014 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 CD19P15391 556 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 TRPC3Q13507 836 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 ZNF526Q8TF50 670 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-218ENST00000482171 RTFDC1Q9BY42 306 aaPredicted RBP12.37□□□□□ -0.43
SMPD4-218ENST00000482171 WDR11Q9BZH6 1224 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 SUGT1Q9Y2Z0 365 aa12.37□□□□□ -0.43
SMPD4-218ENST00000482171 ABCB11O95342 1321 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 LRRN2O75325 713 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 KIF4AO95239 1232 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 RASSF7Q02833 373 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 MAN2A1Q16706 1144 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 FAM160B2Q86V87 743 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 RPGRIP1Q96KN7 1286 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 CEP170P1Q96L14 293 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 PRMT6Q96LA8 375 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-218ENST00000482171 KCNQ5Q9NR82 932 aa12.36□□□□□ -0.43
SMPD4-218ENST00000482171 SAMD15Q9P1V8 674 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms