RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 METTL7BQ6UX53 244 aa21.48■■□□□ 1.03
AGRN-208ENST00000479707 IL27Q8NEV9 243 aa21.48■■□□□ 1.03
AGRN-208ENST00000479707 PRDM5Q9NQX1 630 aaPredicted RBP21.48■■□□□ 1.03
AGRN-208ENST00000479707 EDIL3O43854 480 aa21.47■■□□□ 1.03
AGRN-208ENST00000479707 ZNF286BP0CG31 522 aa21.47■■□□□ 1.03
AGRN-208ENST00000479707 CDK7P50613 346 aa21.47■■□□□ 1.03
AGRN-208ENST00000479707 NBPF20Q3BBV1 942 aa21.47■■□□□ 1.03
AGRN-208ENST00000479707 KRT40Q6A162 431 aa21.47■■□□□ 1.03
AGRN-208ENST00000479707 FAM184AQ8NB25 1140 aa21.47■■□□□ 1.03
AGRN-208ENST00000479707 GIMAP8Q8ND71 665 aaPredicted RBP21.47■■□□□ 1.03
AGRN-208ENST00000479707 CCDC194A0A1B0GVG4 234 aa21.46■■□□□ 1.03
AGRN-208ENST00000479707 DCDC2CA8MYV0 355 aa21.46■■□□□ 1.03
AGRN-208ENST00000479707 KRT2P35908 639 aa21.46■■□□□ 1.03
AGRN-208ENST00000479707 HMGN5P82970 282 aaKnown RBP21.46■■□□□ 1.03
AGRN-208ENST00000479707 NONOQ15233 471 aaKnown RBP eCLIP21.46■■□□□ 1.03
AGRN-208ENST00000479707 INF2Q27J81 1249 aa21.46■■□□□ 1.03
AGRN-208ENST00000479707 PRR16Q569H4 304 aa21.46■■□□□ 1.03
AGRN-208ENST00000479707 FAM47CQ5HY64 1035 aa21.46■■□□□ 1.03
AGRN-208ENST00000479707 KRT25Q7Z3Z0 450 aa21.46■■□□□ 1.03
AGRN-208ENST00000479707 SH3RF1Q7Z6J0 888 aa21.46■■□□□ 1.03
AGRN-208ENST00000479707 KAT2BQ92831 832 aa21.46■■□□□ 1.03
AGRN-208ENST00000479707 GPR20Q99678 358 aa21.46■■□□□ 1.03
AGRN-208ENST00000479707 AGO4Q9HCK5 861 aaKnown RBP21.46■■□□□ 1.03
AGRN-208ENST00000479707 BRMS1Q9HCU9 246 aa21.46■■□□□ 1.03
AGRN-208ENST00000479707 IGLV3-22A0A075B6J6 115 aa21.45■■□□□ 1.02
AGRN-208ENST00000479707 PPFIA4O75335 1185 aa21.45■■□□□ 1.02
AGRN-208ENST00000479707 MMP1P03956 469 aa21.45■■□□□ 1.02
AGRN-208ENST00000479707 USP11P51784 963 aa21.45■■□□□ 1.02
AGRN-208ENST00000479707 NR5A1Q13285 461 aa21.45■■□□□ 1.02
AGRN-208ENST00000479707 UTP14CQ5TAP6 766 aaKnown RBP21.45■■□□□ 1.02
AGRN-208ENST00000479707 PRPF38BQ5VTL8 546 aaKnown RBP21.45■■□□□ 1.02
AGRN-208ENST00000479707 PIK3AP1Q6ZUJ8 805 aa21.45■■□□□ 1.02
AGRN-208ENST00000479707 NIPA1Q7RTP0 329 aa21.45■■□□□ 1.02
AGRN-208ENST00000479707 SLC43A3Q8NBI5 491 aa21.45■■□□□ 1.02
AGRN-208ENST00000479707 C8orf76Q96K31 380 aa21.45■■□□□ 1.02
AGRN-208ENST00000479707 PRKAG2Q9UGJ0 569 aa21.45■■□□□ 1.02
AGRN-208ENST00000479707 SCN10AQ9Y5Y9 1956 aa21.45■■□□□ 1.02
AGRN-208ENST00000479707 BTBD18B2RXH4 712 aa21.44■■□□□ 1.02
AGRN-208ENST00000479707 DDX39AO00148 427 aaKnown RBP21.44■■□□□ 1.02
AGRN-208ENST00000479707 CLTBP09497 229 aa21.44■■□□□ 1.02
AGRN-208ENST00000479707 CIITAP33076 1130 aa21.44■■□□□ 1.02
AGRN-208ENST00000479707 FAAP100Q0VG06 881 aa21.44■■□□□ 1.02
AGRN-208ENST00000479707 ITGB3BPQ13352 177 aaPredicted RBP21.44■■□□□ 1.02
AGRN-208ENST00000479707 EARS2Q5JPH6 523 aaKnown RBP21.44■■□□□ 1.02
AGRN-208ENST00000479707 ANKRD33Q7Z3H0 272 aa21.44■■□□□ 1.02
AGRN-208ENST00000479707 SDF4Q9BRK5 362 aa21.44■■□□□ 1.02
AGRN-208ENST00000479707 PDLIM7Q9NR12 457 aa21.44■■□□□ 1.02
AGRN-208ENST00000479707 MROH7Q68CQ1 1323 aa21.44■■□□□ 1.02
AGRN-208ENST00000479707 FAM205CA6NFA0 338 aa21.43■■□□□ 1.02
AGRN-208ENST00000479707 LGALS2P05162 132 aa21.43■■□□□ 1.02
AGRN-208ENST00000479707 PSEN2P49810 448 aa21.43■■□□□ 1.02
AGRN-208ENST00000479707 LETM2Q2VYF4 491 aa21.43■■□□□ 1.02
AGRN-208ENST00000479707 FAM126BQ8IXS8 530 aa21.43■■□□□ 1.02
AGRN-208ENST00000479707 DIS3L2Q8IYB7 885 aaKnown RBP21.43■■□□□ 1.02
AGRN-208ENST00000479707 TOX2Q96NM4 488 aa21.43■■□□□ 1.02
AGRN-208ENST00000479707 ZNF577Q9BSK1 485 aa21.43■■□□□ 1.02
AGRN-208ENST00000479707 TRPV6Q9H1D0 765 aa21.43■■□□□ 1.02
AGRN-208ENST00000479707 JPH1Q9HDC5 661 aaPredicted RBP21.43■■□□□ 1.02
AGRN-208ENST00000479707 TMEM39AQ9NV64 488 aa21.43■■□□□ 1.02
AGRN-208ENST00000479707 SLC9A2Q9UBY0 812 aa21.43■■□□□ 1.02
AGRN-208ENST00000479707 GSTTP1A0A1W2PQM5 241 aa21.42■■□□□ 1.02
AGRN-208ENST00000479707 TRIM43BA6NCK2 446 aa21.42■■□□□ 1.02
AGRN-208ENST00000479707 TLR3O15455 904 aaKnown RBP21.42■■□□□ 1.02
AGRN-208ENST00000479707 TDP2O95551 362 aa21.42■■□□□ 1.02
AGRN-208ENST00000479707 HOXD8P13378 290 aaPredicted RBP21.42■■□□□ 1.02
AGRN-208ENST00000479707 TCF7P36402 384 aaPredicted RBP21.42■■□□□ 1.02
AGRN-208ENST00000479707 SETQ01105 290 aaPredicted RBP21.42■■□□□ 1.02
AGRN-208ENST00000479707 MFSD10Q14728 455 aa21.42■■□□□ 1.02
AGRN-208ENST00000479707 KIAA0753Q2KHM9 967 aa21.42■■□□□ 1.02
AGRN-208ENST00000479707 SEPT1Q8WYJ6 367 aa21.42■■□□□ 1.02
AGRN-208ENST00000479707 TRIM43Q96BQ3 446 aaPredicted RBP21.42■■□□□ 1.02
AGRN-208ENST00000479707 C16orf70Q9BSU1 422 aa21.42■■□□□ 1.02
AGRN-208ENST00000479707 DNAH12Q6ZR08 3092 aa21.41■■□□□ 1.02
AGRN-208ENST00000479707 NFASCO94856 1347 aa21.41■■□□□ 1.02
AGRN-208ENST00000479707 IPO5O00410 1097 aaKnown RBP21.41■■□□□ 1.02
AGRN-208ENST00000479707 B4GALT4O60513 344 aa21.41■■□□□ 1.02
AGRN-208ENST00000479707 MDM2Q00987 491 aaPredicted RBP21.41■■□□□ 1.02
AGRN-208ENST00000479707 SAFBQ15424 915 aaKnown RBP eCLIP21.41■■□□□ 1.02
AGRN-208ENST00000479707 TRIM50Q86XT4 487 aa21.41■■□□□ 1.02
AGRN-208ENST00000479707 TNFRSF25Q93038 417 aa21.41■■□□□ 1.02
AGRN-208ENST00000479707 GJA10Q969M2 543 aa21.41■■□□□ 1.02
AGRN-208ENST00000479707 LENG9Q96B70 501 aa21.41■■□□□ 1.02
AGRN-208ENST00000479707 KATNAL1Q9BW62 490 aa21.41■■□□□ 1.02
AGRN-208ENST00000479707 TRMT13Q9NUP7 481 aaKnown RBP21.41■■□□□ 1.02
AGRN-208ENST00000479707 H3BRB1 525 aa21.4■■□□□ 1.02
AGRN-208ENST00000479707 F2P00734 622 aa21.4■■□□□ 1.02
AGRN-208ENST00000479707 CD4P01730 458 aa21.4■■□□□ 1.02
AGRN-208ENST00000479707 GJB2P29033 226 aa21.4■■□□□ 1.02
AGRN-208ENST00000479707 NFRKBQ6P4R8 1299 aa21.4■■□□□ 1.02
AGRN-208ENST00000479707 NEK8Q86SG6 692 aa21.4■■□□□ 1.02
AGRN-208ENST00000479707 C7orf31Q8N865 590 aa21.4■■□□□ 1.02
AGRN-208ENST00000479707 SEZ6LQ9BYH1 1024 aa21.4■■□□□ 1.02
AGRN-208ENST00000479707 TUT1Q9H6E5 874 aaKnown RBP21.4■■□□□ 1.02
AGRN-208ENST00000479707 HDAC6Q9UBN7 1215 aa21.4■■□□□ 1.02
AGRN-208ENST00000479707 HAS3O00219 553 aa21.39■■□□□ 1.01
AGRN-208ENST00000479707 MSH4O15457 936 aa21.39■■□□□ 1.01
AGRN-208ENST00000479707 DHX15O43143 795 aaKnown RBP21.39■■□□□ 1.01
AGRN-208ENST00000479707 CCNT1O60563 726 aaKnown RBP21.39■■□□□ 1.01
AGRN-208ENST00000479707 ITGB8P26012 769 aa21.39■■□□□ 1.01
AGRN-208ENST00000479707 ACTR2P61160 394 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms