RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 UBXN1Q04323 297 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 CTDSPL2Q05D32 466 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PPATQ06203 517 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 GABPAQ06546 454 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PKN2Q16513 984 aaKnown RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 LRRC47Q8N1G4 583 aaKnown RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 TTC25Q96NG3 672 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 ACAP3Q96P50 834 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 LRRC4Q9HBW1 653 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 ZNF302Q9NR11 478 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 GGA3Q9NZ52 723 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PKD2L1Q9P0L9 805 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 KANSL3Q9P2N6 904 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 WWC3Q9ULE0 1092 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 MYPNQ86TC9 1320 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 CCDC66A2RUB6 948 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 A6NJR5 290 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 H0YHG0 523 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 OPA1O60313 960 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 CD4P01730 458 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 P4HBP07237 508 aaKnown RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 TBXAS1P24557 533 aaPredicted RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PNPLA4P41247 253 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PRELPP51888 382 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 SLC12A2P55011 1212 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PPP4CP60510 307 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PSMC5P62195 406 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 PRPF4BQ13523 1007 aaKnown RBP5.05□□□□□ -1.6
CCNL1-215ENST00000474539 SPECC1Q5M775 1068 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 ZNF365Q70YC5 407 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 TMTC1Q8IUR5 882 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 CPLX3Q8WVH0 158 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 TIGD1Q96MW7 591 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 TSPAN18Q96SJ8 248 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 RMDN3Q96TC7 470 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 USP26Q9BXU7 913 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 IMPACTQ9P2X3 320 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 MID2Q9UJV3 735 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 UBE4BO95155 1302 aa5.05□□□□□ -1.6
CCNL1-215ENST00000474539 HSPA6P17066 643 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 VAV2P52735 878 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 OXCT1P55809 520 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 MTMR1Q13613 665 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 SKIV2LQ15477 1246 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 DGKDQ16760 1214 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 PTPROQ16827 1216 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 FAM26FQ5R3K3 315 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 STKLD1Q8NE28 680 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 APPL2Q8NEU8 664 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 UCMAQ8WVF2 138 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 POMGNT1Q8WZA1 660 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 RAB3IPQ96QF0 476 aaPredicted RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 CDK5RAP1Q96SZ6 601 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 ANO3Q9BYT9 981 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 VCPKMTQ9H867 229 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 BCAP29Q9UHQ4 241 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 SALL1Q9NSC2 1324 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 DDX39AO00148 427 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 HNRNPDLO14979 420 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 GPR182O15218 404 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 HUS1O60921 280 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 S100BP04271 92 aaPredicted RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 ALDH1A3P47895 512 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 FSTL1Q12841 308 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 GRM4Q14833 912 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 DEFB115Q30KQ5 88 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 ZNF484Q5JVG2 852 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 LRRC31Q6UY01 552 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 SIX6OS1Q8N1H7 587 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 TBC1D19Q8N5T2 526 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 MTRQ99707 1265 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 MRPL4Q9BYD3 311 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 PARVGQ9HBI0 331 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 TUFT1Q9NNX1 390 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 PANK4Q9NVE7 773 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 RAB20Q9NX57 234 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 HBP1O60381 514 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 CRCPO75575 148 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 GARSP41250 739 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 PIK3CAP42336 1068 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 PTPN12Q05209 780 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 SPP2Q13103 211 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 TMEM132BQ14DG7 1078 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 DCAF4L1Q3SXM0 396 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 RABL6Q3YEC7 729 aaPredicted RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 C15orf52Q6ZUT6 534 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 DPH6Q7L8W6 267 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 GPRASP2Q96D09 838 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 TNIP3Q96KP6 325 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 KIF2CQ99661 725 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 PITPNM2Q9BZ72 1349 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 C17orf75Q9HAS0 396 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 TYW1Q9NV66 732 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 ANAPC5Q9UJX4 755 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 SYNRGQ9UMZ2 1314 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 A0A1W2PQ27 194 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 A0A1W2PQ64 194 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 A0A1W2PQD8 194 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 K7ERI5 159 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 SH3BP5O60239 455 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms