RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 CYP2C8P10632 490 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 RPS8P62241 208 aaKnown RBP4.74□□□□□ -1.65
LRCH3-213ENST00000471667 BNIP3Q12983 259 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 CDK5R2Q13319 367 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 PPIGQ13427 754 aaKnown RBP eCLIP4.74□□□□□ -1.65
LRCH3-213ENST00000471667 RPS26P11Q5JNZ5 115 aaPredicted RBP4.74□□□□□ -1.65
LRCH3-213ENST00000471667 DACT2Q5SW24 774 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 TTLL5Q6EMB2 1281 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 PSRC1Q6PGN9 363 aaPredicted RBP4.74□□□□□ -1.65
LRCH3-213ENST00000471667 CCAR1Q8IX12 1150 aaKnown RBP4.74□□□□□ -1.65
LRCH3-213ENST00000471667 FAM178BQ8IXR5 827 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 PLD6Q8N2A8 252 aaKnown RBP4.74□□□□□ -1.65
LRCH3-213ENST00000471667 FAM181AQ8N9Y4 354 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 ARRDC4Q8NCT1 418 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 SOCS4Q8WXH5 440 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 CCDC74AQ96AQ1 378 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 MISP3Q96FF7 219 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 WDR89Q96FK6 387 aaPredicted RBP4.74□□□□□ -1.65
LRCH3-213ENST00000471667 FAM129BQ96TA1 746 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 COA1Q9GZY4 146 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 C1orf115Q9H7X2 142 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 PIDD1Q9HB75 910 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 CWC22Q9HCG8 908 aaKnown RBP4.74□□□□□ -1.65
LRCH3-213ENST00000471667 CRIM1Q9NZV1 1036 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 RPAP1Q9BWH6 1393 aaPredicted RBP4.74□□□□□ -1.65
LRCH3-213ENST00000471667 LRRC37A2A6NM11 1700 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 ZSWIM8A7E2V4 1837 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 ZFHX4Q86UP3 3567 aa4.74□□□□□ -1.65
LRCH3-213ENST00000471667 AOX1Q06278 1338 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 LAMB2P55268 1798 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 UNC79Q9P2D8 2635 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 BIN1O00499 593 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 EIF1AYO14602 144 aaKnown RBP4.73□□□□□ -1.65
LRCH3-213ENST00000471667 GADD45BO75293 160 aaPredicted RBP4.73□□□□□ -1.65
LRCH3-213ENST00000471667 CLTBP09497 229 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 SLFN14P0C7P3 912 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 SLC5A1P13866 664 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 SDHBP21912 280 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 ID3Q02535 119 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 FAAP100Q0VG06 881 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 TCF15Q12870 199 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 MTHFSDQ2M296 383 aaKnown RBP4.73□□□□□ -1.65
LRCH3-213ENST00000471667 TRIM60Q495X7 471 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 B4GALNT3Q6L9W6 998 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 BMP8AQ7Z5Y6 402 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 ADSSL1Q8N142 457 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 NETO1Q8TDF5 533 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 LPAR1Q92633 364 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 CELF1Q92879 486 aaKnown RBP4.73□□□□□ -1.65
LRCH3-213ENST00000471667 FANCD2OSQ96PS1 177 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 NKX2-4Q9H2Z4 354 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 ATXN3LQ9H3M9 355 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 PDLIM7Q9NR12 457 aa4.73□□□□□ -1.65
LRCH3-213ENST00000471667 RRP7AQ9Y3A4 280 aaKnown RBP4.73□□□□□ -1.65
LRCH3-213ENST00000471667 PTPRZ1P23471 2315 aaPredicted RBP4.73□□□□□ -1.65
LRCH3-213ENST00000471667 ZFHX2Q9C0A1 2572 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-213ENST00000471667 SPTBN4Q9H254 2564 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 ZNF862O60290 1169 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 CD8BP10966 210 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 XRCC5P13010 732 aaKnown RBP4.72□□□□□ -1.65
LRCH3-213ENST00000471667 MYL6BP14649 208 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 POU3F3P20264 500 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-213ENST00000471667 CYP2B6P20813 491 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 FUT4P22083 530 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 CNGA1P29973 690 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 PABPC4Q13310 644 aaKnown RBP eCLIP4.72□□□□□ -1.65
LRCH3-213ENST00000471667 FAM110CQ1W6H9 321 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 CFAP100Q494V2 611 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 MAP3K21Q5TCX8 1036 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 MFSD14CQ5VZR4 134 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 SLC39A5Q6ZMH5 540 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 ASCL5Q7RTU5 278 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 SMYD4Q8IYR2 804 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-213ENST00000471667 ANKRD13CQ8N6S4 541 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 RTF1Q92541 710 aaKnown RBP4.72□□□□□ -1.65
LRCH3-213ENST00000471667 ZBED3Q96IU2 234 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-213ENST00000471667 CITED4Q96RK1 184 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 FSD1Q9BTV5 496 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 DNAJC25Q9H1X3 360 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 CD320Q9NPF0 282 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 DISC1Q9NRI5 854 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 TMEM39AQ9NV64 488 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 TMOD2Q9NZR1 351 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 PRKAG3Q9UGI9 489 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 USTQ9Y2C2 406 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 SLC45A1Q9Y2W3 748 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 MTCH2Q9Y6C9 303 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 SNCAIPQ9Y6H5 919 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-213ENST00000471667 MED23Q9ULK4 1368 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 ANKRD11Q6UB99 2663 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-213ENST00000471667 KMT2BQ9UMN6 2715 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-213ENST00000471667 GAKO14976 1311 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 ZNF521Q96K83 1311 aa4.72□□□□□ -1.65
LRCH3-213ENST00000471667 COL3A1P02461 1466 aaPredicted RBP4.71□□□□□ -1.66
LRCH3-213ENST00000471667 DCDC2CA8MYV0 355 aa4.71□□□□□ -1.66
LRCH3-213ENST00000471667 CXCL11O14625 94 aa4.71□□□□□ -1.66
LRCH3-213ENST00000471667 GPR182O15218 404 aa4.71□□□□□ -1.66
LRCH3-213ENST00000471667 RNGTTO60942 597 aaKnown RBP4.71□□□□□ -1.66
LRCH3-213ENST00000471667 GSTP1P09211 210 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms