RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 ADAMTS3O15072 1205 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 RGS20O76081 388 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 SGPL1O95470 568 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 RARBP10826 455 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 PDCP20941 246 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 CNGA1P29973 690 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 CIITAP33076 1130 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 GJA8P48165 433 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 TNFAIP2Q03169 654 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 BECN1Q14457 450 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 TTLL4Q14679 1199 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 NONOQ15233 471 aaKnown RBP eCLIP11.32□□□□□ -0.6
VPS45-204ENST00000460366 DUSP28Q4G0W2 176 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 CCDC62Q6P9F0 684 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 EEPD1Q7L9B9 569 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 NLRX1Q86UT6 975 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 FBXO16Q8IX29 292 aaPredicted RBP11.32□□□□□ -0.6
VPS45-204ENST00000460366 RASGRP4Q8TDF6 673 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 TNFRSF25Q93038 417 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 GPRASP2Q96D09 838 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 CDHR1Q96JP9 859 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 WDR11Q9BZH6 1224 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 FOXP1Q9H334 677 aaPredicted RBP11.32□□□□□ -0.6
VPS45-204ENST00000460366 JADE2Q9NQC1 790 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 OGDHLQ9ULD0 1010 aa11.32□□□□□ -0.6
VPS45-204ENST00000460366 CYP3A7-CYP3A51PA0A087WV96 503 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 CCDC194A0A1B0GVG4 234 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 BTBD18B2RXH4 712 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 SPATA31C2B4DYI2 1134 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 MEIS1O00470 390 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 FIBPO43427 364 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 CYP3A7P24462 503 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 ADCYAP1R1P41586 468 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 PTPN5P54829 565 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 CEP55Q53EZ4 464 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 LARP1BQ659C4 914 aaKnown RBP11.31□□□□□ -0.6
VPS45-204ENST00000460366 MOXD1Q6UVY6 613 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 SEPT14Q6ZU15 432 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 DIS3L2Q8IYB7 885 aaKnown RBP11.31□□□□□ -0.6
VPS45-204ENST00000460366 U2AF1L4Q8WU68 220 aaKnown RBP11.31□□□□□ -0.6
VPS45-204ENST00000460366 DEFB118Q96PH6 123 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 NAP1L4Q99733 375 aaKnown RBP11.31□□□□□ -0.6
VPS45-204ENST00000460366 SENP7Q9BQF6 1050 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 MXRA8Q9BRK3 442 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 UPF3AQ9H1J1 476 aaKnown RBP11.31□□□□□ -0.6
VPS45-204ENST00000460366 PDGFCQ9NRA1 345 aa11.31□□□□□ -0.6
VPS45-204ENST00000460366 DDX41Q9UJV9 622 aaKnown RBP11.31□□□□□ -0.6
VPS45-204ENST00000460366 GNEQ9Y223 722 aaKnown RBP11.31□□□□□ -0.6
VPS45-204ENST00000460366 DDX49Q9Y6V7 483 aaKnown RBP11.31□□□□□ -0.6
VPS45-204ENST00000460366 EDIL3O43854 480 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 TXNP10599 105 aaKnown RBP11.3□□□□□ -0.6
VPS45-204ENST00000460366 SMPD1P17405 629 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 ITGB5P18084 799 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 U2AF2P26368 475 aaKnown RBP eCLIP11.3□□□□□ -0.62e-6■□□□□ 10.1
VPS45-204ENST00000460366 ZNF76P36508 570 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 PRSS12P56730 875 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 ANKLE1Q8NAG6 615 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 ARRDC4Q8NCT1 418 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 TBCKQ8TEA7 893 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 PGBD1Q96JS3 809 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 MBOAT7Q96N66 472 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 SPC25Q9HBM1 224 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 NPDC1Q9NQX5 325 aaPredicted RBP11.3□□□□□ -0.6
VPS45-204ENST00000460366 RTEL1Q9NZ71 1219 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 MRVI1Q9Y6F6 885 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 MCM3APO60318 1980 aa11.3□□□□□ -0.6
VPS45-204ENST00000460366 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.29□□□□□ -0.6
VPS45-204ENST00000460366 C3orf80F5H4A9 247 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 H3BQV1 296 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 MYCP01106 439 aaPredicted RBP11.29□□□□□ -0.6
VPS45-204ENST00000460366 TFRCP02786 760 aaKnown RBP11.29□□□□□ -0.6
VPS45-204ENST00000460366 HSP90AA1P07900 732 aaKnown RBP11.29□□□□□ -0.6
VPS45-204ENST00000460366 GCFC2P16383 781 aaKnown RBP11.29□□□□□ -0.6
VPS45-204ENST00000460366 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
VPS45-204ENST00000460366 GJA9P57773 515 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 GUCY1B3Q02153 619 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 NR5A1Q13285 461 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 LAMC2Q13753 1193 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 NEDD9Q14511 834 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 PPP4R3AQ6IN85 833 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 PIK3AP1Q6ZUJ8 805 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 NEK8Q86SG6 692 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 LAPTM4BQ86VI4 370 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 GIMAP8Q8ND71 665 aaPredicted RBP11.29□□□□□ -0.6
VPS45-204ENST00000460366 KLHDC9Q8NEP7 349 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 EMID1Q96A84 441 aaPredicted RBP11.29□□□□□ -0.6
VPS45-204ENST00000460366 TSEN34Q9BSV6 310 aaKnown RBP11.29□□□□□ -0.6
VPS45-204ENST00000460366 AP5M1Q9H0R1 490 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 XPNPEP3Q9NQH7 507 aa11.29□□□□□ -0.6
VPS45-204ENST00000460366 KIAA0100Q14667 2235 aaKnown RBP11.29□□□□□ -0.6
VPS45-204ENST00000460366 IGLV3-22A0A075B6J6 115 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 CCDC85CA6NKD9 419 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 FAM86B1E9PN63 330 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 DYNC1LI2O43237 492 aaPredicted RBP11.28□□□□□ -0.6
VPS45-204ENST00000460366 ADCY6O43306 1168 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 ADAMTS4O75173 837 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 ARIH2O95376 493 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 GH1P01241 217 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 FAM86B2P0C5J1 330 aa11.28□□□□□ -0.6
VPS45-204ENST00000460366 TRAPPC10P48553 1259 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms