RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 SPATA33Q96N06 139 aa20.08■□□□□ 0.81
UBE2D4-209ENST00000454428 IFIH1Q9BYX4 1025 aaKnown RBP20.08■□□□□ 0.81
UBE2D4-209ENST00000454428 C17orf102A2RUQ5 167 aa20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 GGPS1O95749 300 aa20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 SMIM10L2AP0DMW4 78 aa20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 SMIM10L2BP0DMW5 78 aa20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 UBA1P22314 1058 aaKnown RBP20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 MFSD6Q6ZSS7 791 aa20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 IL31RAQ8NI17 732 aa20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 PDCD2LQ9BRP1 358 aa20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 RNPEPQ9H4A4 650 aa20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 JMJD4Q9H9V9 463 aa20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 RC3H2Q9HBD1 1191 aaKnown RBP20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 MRPL11Q9Y3B7 192 aaKnown RBP20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 PCDHB15Q9Y5E8 787 aa20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 KMT2EQ8IZD2 1858 aa20.07■□□□□ 0.8
UBE2D4-209ENST00000454428 ZDBF2Q9HCK1 2354 aa20.06■□□□□ 0.8
UBE2D4-209ENST00000454428 LINC01565O15544 149 aa20.06■□□□□ 0.8
UBE2D4-209ENST00000454428 NCK2O43639 380 aa20.06■□□□□ 0.8
UBE2D4-209ENST00000454428 CFBP00751 764 aa20.06■□□□□ 0.8
UBE2D4-209ENST00000454428 CTNNB1P35222 781 aa20.06■□□□□ 0.8
UBE2D4-209ENST00000454428 MCMDC2Q4G0Z9 681 aa20.06■□□□□ 0.8
UBE2D4-209ENST00000454428 BMP8AQ7Z5Y6 402 aa20.06■□□□□ 0.8
UBE2D4-209ENST00000454428 DGKHQ86XP1 1220 aa20.06■□□□□ 0.8
UBE2D4-209ENST00000454428 PNMA1Q8ND90 353 aa20.06■□□□□ 0.8
UBE2D4-209ENST00000454428 EDAQ92838 391 aa20.06■□□□□ 0.8
UBE2D4-209ENST00000454428 EVI5LQ96CN4 794 aa20.06■□□□□ 0.8
UBE2D4-209ENST00000454428 ALG13Q9NP73 1137 aaKnown RBP20.06■□□□□ 0.8
UBE2D4-209ENST00000454428 LAMA4Q16363 1823 aa20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 H3BRB1 525 aa20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 PCP11498 1178 aaKnown RBP20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 MYCLP12524 364 aaPredicted RBP20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 SMAD4Q13485 552 aaKnown RBP20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 CAMK1Q14012 370 aa20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 STOX1Q6ZVD7 989 aa20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 VSIG10LQ86VR7 867 aa20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 FIBCD1Q8N539 461 aa20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 IL17RAQ96F46 866 aa20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 ZFP91Q96JP5 570 aaPredicted RBP20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 TUT1Q9H6E5 874 aaKnown RBP20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 DOCK5Q9H7D0 1870 aa20.05■□□□□ 0.8
UBE2D4-209ENST00000454428 PPP1R11O60927 126 aaPredicted RBP20.04■□□□□ 0.8
UBE2D4-209ENST00000454428 CAND2O75155 1236 aa20.04■□□□□ 0.8
UBE2D4-209ENST00000454428 LGALS2P05162 132 aa20.04■□□□□ 0.8
UBE2D4-209ENST00000454428 RB1P06400 928 aa20.04■□□□□ 0.8
UBE2D4-209ENST00000454428 BMPR1AP36894 532 aa20.04■□□□□ 0.8
UBE2D4-209ENST00000454428 TCF15Q12870 199 aa20.04■□□□□ 0.8
UBE2D4-209ENST00000454428 PGM5Q15124 567 aa20.04■□□□□ 0.8
UBE2D4-209ENST00000454428 CLP1Q92989 425 aaKnown RBP20.04■□□□□ 0.8
UBE2D4-209ENST00000454428 POP1Q99575 1024 aaKnown RBP20.04■□□□□ 0.8
UBE2D4-209ENST00000454428 LMAN2LQ9H0V9 348 aa20.04■□□□□ 0.8
UBE2D4-209ENST00000454428 STXBP3O00186 592 aa20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 ADAM17P78536 824 aa20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 NMIQ13287 307 aaPredicted RBP20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 ASPRV1Q53RT3 343 aa20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 FAM26DQ5JW98 314 aa20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 KCNV1Q6PIU1 500 aa20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 ESR2Q92731 530 aa20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 APBB2Q92870 758 aa20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 MSLNLQ96KJ4 702 aa20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 C11orf84Q9BUA3 381 aaPredicted RBP20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 VAT1LQ9HCJ6 419 aa20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 TELO2Q9Y4R8 837 aa20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 KIAA1671Q9BY89 1806 aa20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 CACNA1HO95180 2353 aa20.03■□□□□ 0.8
UBE2D4-209ENST00000454428 ZFHX2Q9C0A1 2572 aaPredicted RBP20.02■□□□□ 0.8
UBE2D4-209ENST00000454428 TGFB3P10600 412 aa20.02■□□□□ 0.8
UBE2D4-209ENST00000454428 ADAM15Q13444 863 aa20.02■□□□□ 0.8
UBE2D4-209ENST00000454428 TRIM67Q6ZTA4 783 aa20.02■□□□□ 0.8
UBE2D4-209ENST00000454428 SETD4Q9NVD3 440 aa20.02■□□□□ 0.8
UBE2D4-209ENST00000454428 CD207Q9UJ71 328 aa20.02■□□□□ 0.8
UBE2D4-209ENST00000454428 SUPT16HQ9Y5B9 1047 aaKnown RBP20.02■□□□□ 0.8
UBE2D4-209ENST00000454428 TTC3P53804 2025 aa20.02■□□□□ 0.79
UBE2D4-209ENST00000454428 ADGRA3Q8IWK6 1321 aa20.02■□□□□ 0.79
UBE2D4-209ENST00000454428 DCHS1Q96JQ0 3298 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 VPS13AQ96RL7 3174 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 TMEM221A6NGB7 291 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 M0R296 226 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 EYA4O95677 639 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 CHRNA1P02708 482 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 MMP1P03956 469 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 HOXA13P31271 388 aaPredicted RBP20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 PTPN5P54829 565 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 STAG2Q8N3U4 1231 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 ENAHQ8N8S7 591 aaPredicted RBP20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 ZNF689Q96CS4 500 aaPredicted RBP20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 MTMR8Q96EF0 704 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 IGFLR1Q9H665 355 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 KAT14Q9H8E8 782 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 CLEC1BQ9P126 229 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 CCDC171Q6TFL3 1326 aa20.01■□□□□ 0.79
UBE2D4-209ENST00000454428 ST18O60284 1047 aa20■□□□□ 0.79
UBE2D4-209ENST00000454428 KDM4AO75164 1064 aa20■□□□□ 0.79
UBE2D4-209ENST00000454428 CSPG5O95196 566 aa20■□□□□ 0.79
UBE2D4-209ENST00000454428 DNAJB1P25685 340 aa20■□□□□ 0.79
UBE2D4-209ENST00000454428 TRIM50Q86XT4 487 aa20■□□□□ 0.79
UBE2D4-209ENST00000454428 AMNQ9BXJ7 453 aa20■□□□□ 0.79
UBE2D4-209ENST00000454428 RNF41Q9H4P4 317 aaPredicted RBP20■□□□□ 0.79
UBE2D4-209ENST00000454428 MLXIPQ9HAP2 919 aa20■□□□□ 0.79
UBE2D4-209ENST00000454428 LOC730098B7Z3J9 87 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms