RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 APOA5Q6Q788 366 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 KAT2BQ92831 832 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 PBX4Q9BYU1 374 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 C22orf23Q9BZE7 217 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 RBM28Q9NW13 759 aaKnown RBP10.05□□□□□ -0.8
USP6NL-203ENST00000443016 MSRAQ9UJ68 235 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 SLC4A7Q9Y6M7 1214 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 SCN10AQ9Y5Y9 1956 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 CHD7Q9P2D1 2997 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 MEIS2O14770 477 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 FIBPO43427 364 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 SEC24BO95487 1268 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 F2P00734 622 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 ACTN1P12814 892 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 FOSL2P15408 326 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 PSEN2P49810 448 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 MRPS9P82933 396 aaKnown RBP10.05□□□□□ -0.8
USP6NL-203ENST00000443016 NEDD9Q14511 834 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 RTN1Q16799 776 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 GDF6Q6KF10 455 aaPredicted RBP10.05□□□□□ -0.8
USP6NL-203ENST00000443016 MYLIPQ8WY64 445 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 GPKOWQ92917 476 aaPredicted RBP eCLIP10.05□□□□□ -0.8
USP6NL-203ENST00000443016 ZNF576Q9H609 170 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 HDAC6Q9UBN7 1215 aa10.05□□□□□ -0.8
USP6NL-203ENST00000443016 KLF18A0A0U1RQI7 1052 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 PIK3CDO00329 1044 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 IQCF3P0C7M6 154 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 PBX2P40425 430 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 SP4Q02446 784 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 RAB30Q15771 203 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 TSGA10IPQ3SY00 556 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 RASIP1Q5U651 963 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 PCNX4Q63HM2 1172 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 CYFIP1Q7L576 1253 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 NLRX1Q86UT6 975 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 KRI1Q8N9T8 703 aaKnown RBP10.04□□□□□ -0.8
USP6NL-203ENST00000443016 CAGE1Q8TC20 777 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 INPP4AQ96PE3 977 aaPredicted RBP10.04□□□□□ -0.8
USP6NL-203ENST00000443016 SLC28A3Q9HAS3 691 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 GTF2IRD1Q9UHL9 959 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 KIAA1217Q5T5P2 1943 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 GOLGA8AA7E2F4 631 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 GOLGA8BA8MQT2 603 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 RFC2P35250 354 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 EXOSC10Q01780 885 aaKnown RBP10.04□□□□□ -0.8
USP6NL-203ENST00000443016 XRRA1Q6P2D8 792 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 METTL7BQ6UX53 244 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 SESTD1Q86VW0 696 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 JAKMIP1Q96N16 626 aaKnown RBP10.04□□□□□ -0.8
USP6NL-203ENST00000443016 USP26Q9BXU7 913 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 STK24Q9Y6E0 443 aa10.04□□□□□ -0.8
USP6NL-203ENST00000443016 H3BRB1 525 aa10.03□□□□□ -0.8
USP6NL-203ENST00000443016 ATP2A2P16615 1042 aaKnown RBP10.03□□□□□ -0.8
USP6NL-203ENST00000443016 NAPAP54920 295 aa10.03□□□□□ -0.8
USP6NL-203ENST00000443016 GRIN2CQ14957 1233 aa10.03□□□□□ -0.8
USP6NL-203ENST00000443016 UBE2SQ16763 222 aa10.03□□□□□ -0.8
USP6NL-203ENST00000443016 BLOC1S2Q6QNY1 142 aa10.03□□□□□ -0.8
USP6NL-203ENST00000443016 AFAP1L1Q8TED9 768 aa10.03□□□□□ -0.8
USP6NL-203ENST00000443016 TBC1D32Q96NH3 1257 aa10.03□□□□□ -0.8
USP6NL-203ENST00000443016 TUT1Q9H6E5 874 aaKnown RBP10.03□□□□□ -0.8
USP6NL-203ENST00000443016 EHMT1Q9H9B1 1298 aa10.03□□□□□ -0.8
USP6NL-203ENST00000443016 V9GY48 417 aaPredicted RBP10.03□□□□□ -0.8
USP6NL-203ENST00000443016 FRMPD4Q14CM0 1322 aa10.03□□□□□ -0.8
USP6NL-203ENST00000443016 CCDC196A0A1B0GTZ2 297 aa10.02□□□□□ -0.8
USP6NL-203ENST00000443016 SPATA31C2B4DYI2 1134 aa10.02□□□□□ -0.8
USP6NL-203ENST00000443016 ICAM3P32942 547 aa10.02□□□□□ -0.8
USP6NL-203ENST00000443016 MAFAQ8NHW3 353 aaPredicted RBP10.02□□□□□ -0.8
USP6NL-203ENST00000443016 CDHR1Q96JP9 859 aa10.02□□□□□ -0.8
USP6NL-203ENST00000443016 BCAS3Q9H6U6 928 aa10.02□□□□□ -0.8
USP6NL-203ENST00000443016 LGALS2P05162 132 aa10.02□□□□□ -0.81
USP6NL-203ENST00000443016 CPA1P15085 419 aa10.02□□□□□ -0.81
USP6NL-203ENST00000443016 SELPP16109 830 aa10.02□□□□□ -0.81
USP6NL-203ENST00000443016 METAP2P50579 478 aaKnown RBP eCLIP10.02□□□□□ -0.81
USP6NL-203ENST00000443016 ANAPC15P60006 121 aa10.02□□□□□ -0.81
USP6NL-203ENST00000443016 Q6ZUG5 572 aa10.02□□□□□ -0.81
USP6NL-203ENST00000443016 LRRC8DQ7L1W4 858 aa10.02□□□□□ -0.81
USP6NL-203ENST00000443016 GIMAP8Q8ND71 665 aaPredicted RBP10.02□□□□□ -0.81
USP6NL-203ENST00000443016 PKD2L1Q9P0L9 805 aa10.02□□□□□ -0.81
USP6NL-203ENST00000443016 ZNF215Q9UL58 517 aaPredicted RBP10.02□□□□□ -0.81
USP6NL-203ENST00000443016 HAS3O00219 553 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 HOXD8P13378 290 aaPredicted RBP10.01□□□□□ -0.81
USP6NL-203ENST00000443016 PSMA5P28066 241 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 HSPA4P34932 840 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 RABGGTBP53611 331 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 PTK7Q13308 1070 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 MTMR1Q13613 665 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 UTP14CQ5TAP6 766 aaKnown RBP10.01□□□□□ -0.81
USP6NL-203ENST00000443016 WWC2Q6AWC2 1192 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 BRF1Q92994 677 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 ATP6V0A1Q93050 837 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 GAS2L1Q99501 681 aaPredicted RBP10.01□□□□□ -0.81
USP6NL-203ENST00000443016 SENP7Q9BQF6 1050 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 C16orf70Q9BSU1 422 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 PCDHA6Q9UN73 950 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 PCDHA8Q9Y5H6 950 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 CNTNAP5Q8WYK1 1306 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 XIRP2A4UGR9 3374 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 TTC28Q96AY4 2481 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 MYH7BA7E2Y1 1941 aa10.01□□□□□ -0.81
USP6NL-203ENST00000443016 C17orf102A2RUQ5 167 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms