RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 MMP1P03956 469 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 FAM86B2P0C5J1 330 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 TLE2Q04725 743 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 NONOQ15233 471 aaKnown RBP eCLIP13.44□□□□□ -0.26
HSPG2-206ENST00000439717 KRT40Q6A162 431 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 PLA2G4DQ86XP0 818 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 FAM184AQ8NB25 1140 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 TBCKQ8TEA7 893 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 SDF4Q9BRK5 362 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 KATNAL1Q9BW62 490 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 KIF3AQ9Y496 699 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 ALPK3Q96L96 1907 aa13.44□□□□□ -0.26
HSPG2-206ENST00000439717 CYP3A7-CYP3A51PA0A087WV96 503 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 H0YGN5 161 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 TLR3O15455 904 aaKnown RBP13.43□□□□□ -0.26
HSPG2-206ENST00000439717 SORBS3O60504 671 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 PQBP1O60828 265 aaKnown RBP13.43□□□□□ -0.26
HSPG2-206ENST00000439717 F2P00734 622 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 ARP10275 920 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 CYP3A7P24462 503 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 PSMC6P62333 389 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 PTPN11Q06124 597 aaPredicted RBP13.43□□□□□ -0.26
HSPG2-206ENST00000439717 SAFBQ15424 915 aaKnown RBP eCLIP13.43□□□□□ -0.26
HSPG2-206ENST00000439717 NFRKBQ6P4R8 1299 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 MOXD1Q6UVY6 613 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 OXER1Q8TDS5 423 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 C8orf76Q96K31 380 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 GPR20Q99678 358 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 BCAS3Q9H6U6 928 aa13.43□□□□□ -0.26
HSPG2-206ENST00000439717 JPH1Q9HDC5 661 aaPredicted RBP13.43□□□□□ -0.26
HSPG2-206ENST00000439717 EDIL3O43854 480 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 CLTBP09497 229 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 NBPF20Q3BBV1 942 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 Q4G0T1 1027 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 PRR16Q569H4 304 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 SESTD1Q86VW0 696 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 FAM126BQ8IXS8 530 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 FBXO18Q8NFZ0 1043 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 SEPT1Q8WYJ6 367 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 KAT2BQ92831 832 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 TNFRSF25Q93038 417 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 NAP1L4Q99733 375 aaKnown RBP13.42□□□□□ -0.26
HSPG2-206ENST00000439717 TBC1D22BQ9NU19 505 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 PKD2L1Q9P0L9 805 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 SLC9A2Q9UBY0 812 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 PRKAG2Q9UGJ0 569 aa13.42□□□□□ -0.26
HSPG2-206ENST00000439717 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-206ENST00000439717 MYH7BA7E2Y1 1941 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 BTBD18B2RXH4 712 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 HAS3O00219 553 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 IPO5O00410 1097 aaKnown RBP13.41□□□□□ -0.26
HSPG2-206ENST00000439717 CD4P01730 458 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 LGALS2P05162 132 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 ZNF286BP0CG31 522 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 GCFC2P16383 781 aaKnown RBP13.41□□□□□ -0.26
HSPG2-206ENST00000439717 PSEN2P49810 448 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 FAAP100Q0VG06 881 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 ITGB3BPQ13352 177 aaPredicted RBP13.41□□□□□ -0.26
HSPG2-206ENST00000439717 INF2Q27J81 1249 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 PIK3AP1Q6ZUJ8 805 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 NEK8Q86SG6 692 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 DIS3L2Q8IYB7 885 aaKnown RBP13.41□□□□□ -0.26
HSPG2-206ENST00000439717 LENG9Q96B70 501 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 MBOAT7Q96N66 472 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 ZNF577Q9BSK1 485 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 C16orf70Q9BSU1 422 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 PDLIM7Q9NR12 457 aa13.41□□□□□ -0.26
HSPG2-206ENST00000439717 SCN10AQ9Y5Y9 1956 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 GSTTP1A0A1W2PQM5 241 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 H3BRB1 525 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 KIAA0355O15063 1070 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 SUPT20HL2P0C7V6 817 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 TCF7P36402 384 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-206ENST00000439717 FOSBP53539 338 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 SP4Q02446 784 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 NR5A1Q13285 461 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 CUL4AQ13619 759 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 MFSD10Q14728 455 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 PPP4R3AQ6IN85 833 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 TUT1Q9H6E5 874 aaKnown RBP13.4□□□□□ -0.26
HSPG2-206ENST00000439717 PRDM5Q9NQX1 630 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-206ENST00000439717 TMEM39AQ9NV64 488 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 ZNF215Q9UL58 517 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-206ENST00000439717 ZMYND8Q9ULU4 1186 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-206ENST00000439717 SMC3Q9UQE7 1217 aa13.4□□□□□ -0.26
HSPG2-206ENST00000439717 PDE4DIPQ5VU43 2346 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 TRIM43BA6NCK2 446 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 MSH4O15457 936 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 DHX15O43143 795 aaKnown RBP13.39□□□□□ -0.27
HSPG2-206ENST00000439717 B4GALT4O60513 344 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 ATG7O95352 703 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 TDP2O95551 362 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 SYN1P17600 705 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 GJB2P29033 226 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 ACTR2P61160 394 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 KRT76Q01546 638 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 GUCY1B3Q02153 619 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 KIAA0753Q2KHM9 967 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 LETM2Q2VYF4 491 aa13.39□□□□□ -0.27
HSPG2-206ENST00000439717 FAM47CQ5HY64 1035 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms