RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 CHL1O00533 1208 aa14.91□□□□□ -0.02
LRCH3-206ENST00000438796 CTTNQ14247 550 aaKnown RBP14.91□□□□□ -0.02
LRCH3-206ENST00000438796 FRA10AC1Q70Z53 315 aa14.91□□□□□ -0.02
LRCH3-206ENST00000438796 ZNF274Q96GC6 653 aaPredicted RBP14.91□□□□□ -0.02
LRCH3-206ENST00000438796 PIDD1Q9HB75 910 aa14.91□□□□□ -0.02
LRCH3-206ENST00000438796 CFLARO15519 480 aa14.91□□□□□ -0.02
LRCH3-206ENST00000438796 MED7O43513 233 aa14.91□□□□□ -0.02
LRCH3-206ENST00000438796 AFPP02771 609 aaKnown RBP14.91□□□□□ -0.02
LRCH3-206ENST00000438796 BMP3P12645 472 aa14.91□□□□□ -0.02
LRCH3-206ENST00000438796 SLCO1A2P46721 670 aa14.91□□□□□ -0.02
LRCH3-206ENST00000438796 AFG1LQ8WV93 481 aa14.91□□□□□ -0.02
LRCH3-206ENST00000438796 LARP4BQ92615 738 aaKnown RBP14.91□□□□□ -0.02
LRCH3-206ENST00000438796 GDAQ9Y2T3 454 aa14.91□□□□□ -0.02
LRCH3-206ENST00000438796 A0A087WWV3 80 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 C21orf2O43822 256 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 CDC25AP30304 524 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 MSH2P43246 934 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 TBCCQ15814 346 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 ZNF394Q53GI3 561 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 PRPSAP2O60256 369 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 KRT10P13645 584 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 PPP2R5EQ16537 467 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 PHLDB3Q6NSJ2 640 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 SARS2Q9NP81 518 aaKnown RBP14.9□□□□□ -0.02
LRCH3-206ENST00000438796 PRKAB2O43741 272 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 ZNF233A6NK53 670 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 GOLGA8KD6RF30 607 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 EEF1B2P24534 225 aaKnown RBP14.9□□□□□ -0.02
LRCH3-206ENST00000438796 COPB1P53618 953 aaKnown RBP14.9□□□□□ -0.02
LRCH3-206ENST00000438796 CACNB3P54284 484 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 KCNA1Q09470 495 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 KIF19Q2TAC6 998 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 DCAF4L1Q3SXM0 396 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 ASPRV1Q53RT3 343 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 TMTC3Q6ZXV5 915 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 ACCSLQ4AC99 568 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 STAG1Q8WVM7 1258 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 TUBGCP2Q9BSJ2 902 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 Q9H521 79 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 PARD3Q8TEW0 1356 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 USP17L3A6NCW0 530 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 USP17L4A6NCW7 530 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 USP17L1Q7RTZ2 530 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 NUDCD1Q96RS6 583 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 CAPS2Q9BXY5 557 aa14.9□□□□□ -0.02
LRCH3-206ENST00000438796 TLR7Q9NYK1 1049 aaKnown RBP14.9□□□□□ -0.02
LRCH3-206ENST00000438796 SRP68Q9UHB9 627 aaKnown RBP14.9□□□□□ -0.02
LRCH3-206ENST00000438796 SNX19Q92543 992 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 SOS2Q07890 1332 aaPredicted RBP14.89□□□□□ -0.03
LRCH3-206ENST00000438796 MOCS3O95396 460 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 LONP1P36776 959 aaKnown RBP14.89□□□□□ -0.03
LRCH3-206ENST00000438796 C10orf76Q5T2E6 689 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 PCGF5Q86SE9 256 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 EXOC8Q8IYI6 725 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 SCYL3Q8IZE3 742 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 CCDC138Q96M89 665 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 DENND3A2RUS2 1198 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 SSTR3P32745 418 aaPredicted RBP14.89□□□□□ -0.03
LRCH3-206ENST00000438796 EAF2Q96CJ1 260 aaPredicted RBP14.89□□□□□ -0.03
LRCH3-206ENST00000438796 EPS15L1Q9UBC2 864 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 TBX22Q9Y458 520 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 HS1BP3Q53T59 392 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 TCP11X2Q5H9J9 407 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 ATP8A1Q9Y2Q0 1164 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 H3BRJ5 948 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 DPYSL4O14531 572 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 RPSAP08865 295 aaKnown RBP14.89□□□□□ -0.03
LRCH3-206ENST00000438796 HADHAP40939 763 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 FASTKD5Q7L8L6 764 aaKnown RBP14.89□□□□□ -0.03
LRCH3-206ENST00000438796 TRIM59Q8IWR1 403 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 FBXL13Q8NEE6 735 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 PSAPP07602 524 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 PASD1Q8IV76 773 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 PCDHA7Q9UN72 937 aa14.89□□□□□ -0.03
LRCH3-206ENST00000438796 HIP1RO75146 1068 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 HOXB7P09629 217 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 ART3Q13508 389 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 SLMAPQ14BN4 828 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 WHAMMP3Q1A5X7 153 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 FTCDO95954 541 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 BPIFB4P59827 614 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 SLC27A3Q5K4L6 730 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 PIP4K2CQ8TBX8 421 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 PLS3P13797 630 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 CASP14P31944 242 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 PLTPP55058 493 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 ZNF513Q8N8E2 541 aaPredicted RBP14.88□□□□□ -0.03
LRCH3-206ENST00000438796 PI4K2BG5E9Z4 385 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 EFCAB13Q8IY85 973 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 WDR48Q8TAF3 677 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 MSTO1Q9BUK6 570 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 AFF4Q9UHB7 1163 aaKnown RBP14.88□□□□□ -0.03
LRCH3-206ENST00000438796 CAPRIN1Q14444 709 aaKnown RBP14.88□□□□□ -0.03
LRCH3-206ENST00000438796 CHAMP1Q96JM3 812 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 NR1H4Q96RI1 486 aaPredicted RBP14.88□□□□□ -0.03
LRCH3-206ENST00000438796 SCHIP1Q9P0W5 487 aaPredicted RBP14.88□□□□□ -0.03
LRCH3-206ENST00000438796 PPP1R9AQ9ULJ8 1098 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 UGGT2Q9NYU1 1516 aa14.88□□□□□ -0.03
LRCH3-206ENST00000438796 EPN1Q9Y6I3 576 aaPredicted RBP14.87□□□□□ -0.03
LRCH3-206ENST00000438796 EFCAB8A8MWE9 144 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms