RNA–Protein interactions for RNA: ENST00000427404.5

FARP1-204, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-204ENST00000427404 ZFP91Q96JP5 570 aaPredicted RBP8.28□□□□□ -1.08
FARP1-204ENST00000427404 CTAGE1Q96RT6 745 aa8.28□□□□□ -1.08
FARP1-204ENST00000427404 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.28□□□□□ -1.08
FARP1-204ENST00000427404 C16orf70Q9BSU1 422 aa8.28□□□□□ -1.08
FARP1-204ENST00000427404 RNF26Q9BY78 433 aaPredicted RBP8.28□□□□□ -1.08
FARP1-204ENST00000427404 JADE2Q9NQC1 790 aa8.28□□□□□ -1.08
FARP1-204ENST00000427404 RTEL1Q9NZ71 1219 aa8.28□□□□□ -1.08
FARP1-204ENST00000427404 NAP1L2Q9ULW6 460 aaPredicted RBP8.28□□□□□ -1.08
FARP1-204ENST00000427404 TMEM265A0A087WTH1 108 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 SMCO2A6NFE2 343 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 NOP56O00567 594 aaKnown RBP8.27□□□□□ -1.09
FARP1-204ENST00000427404 LGALS2P05162 132 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 KCNA2P16389 499 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 HOXC8P31273 242 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 SREBF1P36956 1147 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 CCL23P55773 120 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 MTMR1Q13613 665 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 PKN1Q16512 942 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 PTGISQ16647 500 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 KIAA0753Q2KHM9 967 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 MCTP2Q6DN12 878 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 ZNF365Q70YC5 407 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 CYFIP1Q7L576 1253 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 RPUSD2Q8IZ73 545 aaKnown RBP8.27□□□□□ -1.09
FARP1-204ENST00000427404 DEFB123Q8N688 67 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 CCDC155Q8N6L0 562 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 C7orf31Q8N865 590 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 AFAP1L1Q8TED9 768 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 CCDC12Q8WUD4 166 aaPredicted RBP8.27□□□□□ -1.09
FARP1-204ENST00000427404 VWCEQ96DN2 955 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 ZNF274Q96GC6 653 aaPredicted RBP8.27□□□□□ -1.09
FARP1-204ENST00000427404 GPR20Q99678 358 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 MXRA8Q9BRK3 442 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 ANO3Q9BYT9 981 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 ZMYND12Q9H0C1 365 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 MTIF3Q9H2K0 278 aaKnown RBP8.27□□□□□ -1.09
FARP1-204ENST00000427404 HDAC6Q9UBN7 1215 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 DOCK5Q9H7D0 1870 aa8.27□□□□□ -1.09
FARP1-204ENST00000427404 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.26□□□□□ -1.09
FARP1-204ENST00000427404 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.26□□□□□ -1.09
FARP1-204ENST00000427404 H3BRB1 525 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 SORBS3O60504 671 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 ATP9AO75110 1047 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 PARNO95453 639 aaKnown RBP8.26□□□□□ -1.09
FARP1-204ENST00000427404 FGBP02675 491 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 IQCF3P0C7M6 154 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 ACRP10323 421 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 AKAP17AQ02040 695 aaKnown RBP8.26□□□□□ -1.09
FARP1-204ENST00000427404 PTK7Q13308 1070 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 CEP55Q53EZ4 464 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 NIPA1Q7RTP0 329 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 FAM177A1Q8N128 213 aaPredicted RBP8.26□□□□□ -1.09
FARP1-204ENST00000427404 RETREG2Q8NC44 543 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 CCDC148Q8NFR7 591 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 PPP1R13LQ8WUF5 828 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 CRYGNQ8WXF5 182 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 DHX38Q92620 1227 aaKnown RBP8.26□□□□□ -1.09
FARP1-204ENST00000427404 PHKBQ93100 1093 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 ALG1Q9BT22 464 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 UPF3BQ9BZI7 483 aaKnown RBP8.26□□□□□ -1.09
FARP1-204ENST00000427404 TUT1Q9H6E5 874 aaKnown RBP8.26□□□□□ -1.09
FARP1-204ENST00000427404 BCAS3Q9H6U6 928 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 C6orf50Q9HD87 102 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 SH3GLB2Q9NR46 395 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 PDRG1Q9NUG6 133 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 MTMR10Q9NXD2 777 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 ZNF215Q9UL58 517 aaPredicted RBP8.26□□□□□ -1.09
FARP1-204ENST00000427404 NOD1Q9Y239 953 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 NFASCO94856 1347 aa8.26□□□□□ -1.09
FARP1-204ENST00000427404 MEIS1O00470 390 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 CYP3A4P08684 503 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 SELPP16109 830 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 GNA11P29992 359 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 CHMP4BP1P59074 171 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 CCT2P78371 535 aaKnown RBP8.25□□□□□ -1.09
FARP1-204ENST00000427404 ARHGAP4P98171 946 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 TRIM71Q2Q1W2 868 aaKnown RBP8.25□□□□□ -1.09
FARP1-204ENST00000427404 ZNF697Q5TEC3 545 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 Q7L0L9 218 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 SERINC5Q86VE9 423 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 TRIM22Q8IYM9 498 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 REXO1Q8N1G1 1221 aaKnown RBP8.25□□□□□ -1.09
FARP1-204ENST00000427404 BICD2Q8TD16 824 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 SEPT1Q8WYJ6 367 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 SCLYQ96I15 445 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 PGBD1Q96JS3 809 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 SLC26A6Q9BXS9 759 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 NCOA5Q9HCD5 579 aaKnown RBP8.25□□□□□ -1.09
FARP1-204ENST00000427404 KCNH7Q9NS40 1196 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 TMEM260Q9NX78 707 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 TELO2Q9Y4R8 837 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 SCN5AQ14524 2016 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 EMSYQ7Z589 1322 aa8.25□□□□□ -1.09
FARP1-204ENST00000427404 GSTTP1A0A1W2PQM5 241 aa8.24□□□□□ -1.09
FARP1-204ENST00000427404 C17orf102A2RUQ5 167 aa8.24□□□□□ -1.09
FARP1-204ENST00000427404 CPLX1O14810 134 aa8.24□□□□□ -1.09
FARP1-204ENST00000427404 CAND2O75155 1236 aa8.24□□□□□ -1.09
FARP1-204ENST00000427404 LGR5O75473 907 aa8.24□□□□□ -1.09
FARP1-204ENST00000427404 GABBR2O75899 941 aa8.24□□□□□ -1.09
FARP1-204ENST00000427404 BAIAP3O94812 1187 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms