RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 DOCK5Q9H7D0 1870 aa26.74■■□□□ 1.87
PDGFA-205ENST00000426681 PSMC6P62333 389 aa26.73■■□□□ 1.87
PDGFA-205ENST00000426681 PRPF38BQ5VTL8 546 aaKnown RBP26.73■■□□□ 1.87
PDGFA-205ENST00000426681 SORBS3O60504 671 aa26.72■■□□□ 1.87
PDGFA-205ENST00000426681 ARP10275 920 aa26.72■■□□□ 1.87
PDGFA-205ENST00000426681 TRIM29Q14134 588 aa26.72■■□□□ 1.87
PDGFA-205ENST00000426681 TBCKQ8TEA7 893 aa26.72■■□□□ 1.87
PDGFA-205ENST00000426681 GPR20Q99678 358 aa26.72■■□□□ 1.87
PDGFA-205ENST00000426681 AGO4Q9HCK5 861 aaKnown RBP26.72■■□□□ 1.87
PDGFA-205ENST00000426681 NFASCO94856 1347 aa26.71■■□□□ 1.87
PDGFA-205ENST00000426681 MMP1P03956 469 aa26.71■■□□□ 1.87
PDGFA-205ENST00000426681 SETQ01105 290 aaPredicted RBP26.71■■□□□ 1.87
PDGFA-205ENST00000426681 NONOQ15233 471 aaKnown RBP eCLIP26.71■■□□□ 1.87
PDGFA-205ENST00000426681 KRT40Q6A162 431 aa26.71■■□□□ 1.87
PDGFA-205ENST00000426681 PLA2G4DQ86XP0 818 aa26.71■■□□□ 1.87
PDGFA-205ENST00000426681 OXER1Q8TDS5 423 aa26.71■■□□□ 1.87
PDGFA-205ENST00000426681 KAT2BQ92831 832 aa26.71■■□□□ 1.87
PDGFA-205ENST00000426681 DCDC2CA8MYV0 355 aa26.7■■□□□ 1.86
PDGFA-205ENST00000426681 NOP56O00567 594 aaKnown RBP26.7■■□□□ 1.86
PDGFA-205ENST00000426681 PQBP1O60828 265 aaKnown RBP26.7■■□□□ 1.86
PDGFA-205ENST00000426681 KRT2P35908 639 aa26.7■■□□□ 1.86
PDGFA-205ENST00000426681 NFRKBQ6P4R8 1299 aa26.7■■□□□ 1.86
PDGFA-205ENST00000426681 BRMS1Q9HCU9 246 aa26.7■■□□□ 1.86
PDGFA-205ENST00000426681 CYP3A7-CYP3A51PA0A087WV96 503 aa26.69■■□□□ 1.86
PDGFA-205ENST00000426681 CCDC194A0A1B0GVG4 234 aa26.69■■□□□ 1.86
PDGFA-205ENST00000426681 F2P00734 622 aa26.69■■□□□ 1.86
PDGFA-205ENST00000426681 CYP3A7P24462 503 aa26.69■■□□□ 1.86
PDGFA-205ENST00000426681 FAAP100Q0VG06 881 aa26.69■■□□□ 1.86
PDGFA-205ENST00000426681 NBPF20Q3BBV1 942 aa26.69■■□□□ 1.86
PDGFA-205ENST00000426681 FAM126BQ8IXS8 530 aa26.69■■□□□ 1.86
PDGFA-205ENST00000426681 TNFRSF25Q93038 417 aa26.69■■□□□ 1.86
PDGFA-205ENST00000426681 LENG9Q96B70 501 aa26.69■■□□□ 1.86
PDGFA-205ENST00000426681 SDF4Q9BRK5 362 aa26.69■■□□□ 1.86
PDGFA-205ENST00000426681 C16orf70Q9BSU1 422 aa26.69■■□□□ 1.86
PDGFA-205ENST00000426681 PKD2L1Q9P0L9 805 aa26.69■■□□□ 1.86
PDGFA-205ENST00000426681 CLTBP09497 229 aa26.68■■□□□ 1.86
PDGFA-205ENST00000426681 PTPN11Q06124 597 aaPredicted RBP26.68■■□□□ 1.86
PDGFA-205ENST00000426681 ITGB3BPQ13352 177 aaPredicted RBP26.68■■□□□ 1.86
PDGFA-205ENST00000426681 PRR16Q569H4 304 aa26.68■■□□□ 1.86
PDGFA-205ENST00000426681 MOXD1Q6UVY6 613 aa26.68■■□□□ 1.86
PDGFA-205ENST00000426681 FAM184AQ8NB25 1140 aa26.68■■□□□ 1.86
PDGFA-205ENST00000426681 C8orf76Q96K31 380 aa26.68■■□□□ 1.86
PDGFA-205ENST00000426681 KATNAL1Q9BW62 490 aa26.68■■□□□ 1.86
PDGFA-205ENST00000426681 JPH1Q9HDC5 661 aaPredicted RBP26.68■■□□□ 1.86
PDGFA-205ENST00000426681 PDLIM7Q9NR12 457 aa26.68■■□□□ 1.86
PDGFA-205ENST00000426681 ZMYND8Q9ULU4 1186 aaPredicted RBP26.68■■□□□ 1.86
PDGFA-205ENST00000426681 TELO2Q9Y4R8 837 aa26.68■■□□□ 1.86
PDGFA-205ENST00000426681 HAS3O00219 553 aa26.67■■□□□ 1.86
PDGFA-205ENST00000426681 CD4P01730 458 aa26.67■■□□□ 1.86
PDGFA-205ENST00000426681 ZNF286BP0CG31 522 aa26.67■■□□□ 1.86
PDGFA-205ENST00000426681 INF2Q27J81 1249 aa26.67■■□□□ 1.86
PDGFA-205ENST00000426681 MBOAT7Q96N66 472 aa26.67■■□□□ 1.86
PDGFA-205ENST00000426681 SLC9A2Q9UBY0 812 aa26.67■■□□□ 1.86
PDGFA-205ENST00000426681 IPO5O00410 1097 aaKnown RBP26.66■■□□□ 1.86
PDGFA-205ENST00000426681 KIAA0355O15063 1070 aa26.66■■□□□ 1.86
PDGFA-205ENST00000426681 TLR3O15455 904 aaKnown RBP26.66■■□□□ 1.86
PDGFA-205ENST00000426681 DHX15O43143 795 aaKnown RBP26.66■■□□□ 1.86
PDGFA-205ENST00000426681 LGALS2P05162 132 aa26.66■■□□□ 1.86
PDGFA-205ENST00000426681 SYN1P17600 705 aa26.66■■□□□ 1.86
PDGFA-205ENST00000426681 PSEN2P49810 448 aa26.66■■□□□ 1.86
PDGFA-205ENST00000426681 NR5A1Q13285 461 aa26.66■■□□□ 1.86
PDGFA-205ENST00000426681 Q4G0T1 1027 aa26.66■■□□□ 1.86
PDGFA-205ENST00000426681 PIK3AP1Q6ZUJ8 805 aa26.66■■□□□ 1.86
PDGFA-205ENST00000426681 SESTD1Q86VW0 696 aa26.66■■□□□ 1.86
PDGFA-205ENST00000426681 DIS3L2Q8IYB7 885 aaKnown RBP26.66■■□□□ 1.86
PDGFA-205ENST00000426681 FBXO18Q8NFZ0 1043 aa26.66■■□□□ 1.86
PDGFA-205ENST00000426681 SEPT1Q8WYJ6 367 aa26.66■■□□□ 1.86
PDGFA-205ENST00000426681 PRKAG2Q9UGJ0 569 aa26.66■■□□□ 1.86
PDGFA-205ENST00000426681 GSTTP1A0A1W2PQM5 241 aa26.65■■□□□ 1.86
PDGFA-205ENST00000426681 BTBD18B2RXH4 712 aa26.65■■□□□ 1.86
PDGFA-205ENST00000426681 FOSBP53539 338 aa26.65■■□□□ 1.86
PDGFA-205ENST00000426681 SP4Q02446 784 aa26.65■■□□□ 1.86
PDGFA-205ENST00000426681 MFSD10Q14728 455 aa26.65■■□□□ 1.86
PDGFA-205ENST00000426681 SH3RF1Q7Z6J0 888 aa26.65■■□□□ 1.86
PDGFA-205ENST00000426681 NEK8Q86SG6 692 aa26.65■■□□□ 1.86
PDGFA-205ENST00000426681 ZNF577Q9BSK1 485 aa26.65■■□□□ 1.86
PDGFA-205ENST00000426681 TBC1D22BQ9NU19 505 aa26.65■■□□□ 1.86
PDGFA-205ENST00000426681 KIF3AQ9Y496 699 aa26.65■■□□□ 1.86
PDGFA-205ENST00000426681 TRIM43BA6NCK2 446 aa26.64■■□□□ 1.86
PDGFA-205ENST00000426681 H3BRB1 525 aa26.64■■□□□ 1.86
PDGFA-205ENST00000426681 TCF7P36402 384 aaPredicted RBP26.64■■□□□ 1.86
PDGFA-205ENST00000426681 SAFBQ15424 915 aaKnown RBP eCLIP26.64■■□□□ 1.86
PDGFA-205ENST00000426681 KIAA0753Q2KHM9 967 aa26.64■■□□□ 1.86
PDGFA-205ENST00000426681 EARS2Q5JPH6 523 aaKnown RBP26.64■■□□□ 1.86
PDGFA-205ENST00000426681 TRIM43Q96BQ3 446 aaPredicted RBP26.64■■□□□ 1.86
PDGFA-205ENST00000426681 TUT1Q9H6E5 874 aaKnown RBP26.64■■□□□ 1.86
PDGFA-205ENST00000426681 TMEM39AQ9NV64 488 aa26.64■■□□□ 1.86
PDGFA-205ENST00000426681 TBX21Q9UL17 535 aa26.64■■□□□ 1.86
PDGFA-205ENST00000426681 TDP2O95551 362 aa26.63■■□□□ 1.85
PDGFA-205ENST00000426681 CUL4AQ13619 759 aa26.63■■□□□ 1.85
PDGFA-205ENST00000426681 FAM47CQ5HY64 1035 aa26.63■■□□□ 1.85
PDGFA-205ENST00000426681 PPP4R3AQ6IN85 833 aa26.63■■□□□ 1.85
PDGFA-205ENST00000426681 NAP1L4Q99733 375 aaKnown RBP26.63■■□□□ 1.85
PDGFA-205ENST00000426681 TRPV6Q9H1D0 765 aa26.63■■□□□ 1.85
PDGFA-205ENST00000426681 PRDM5Q9NQX1 630 aaPredicted RBP26.63■■□□□ 1.85
PDGFA-205ENST00000426681 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.63■■□□□ 1.85
PDGFA-205ENST00000426681 MSH4O15457 936 aa26.62■■□□□ 1.85
PDGFA-205ENST00000426681 B4GALT4O60513 344 aa26.62■■□□□ 1.85
PDGFA-205ENST00000426681 ATG7O95352 703 aa26.62■■□□□ 1.85
PDGFA-205ENST00000426681 SUPT20HL2P0C7V6 817 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms