RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 KCNJ6P48051 423 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 NAPAP54920 295 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 APOBRQ0VD83 1088 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 SEMA3FQ13275 785 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 HIC1Q14526 733 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 BLOC1S2Q6QNY1 142 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 Q6ZUG5 572 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.66□□□□□ -0.7
NUP50-206ENST00000422489 ATP6V0A1Q93050 837 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 CTAGE1Q96RT6 745 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 GPR20Q99678 358 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 USP26Q9BXU7 913 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 EHMT1Q9H9B1 1298 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 SNX14Q9Y5W7 946 aa10.66□□□□□ -0.7
NUP50-206ENST00000422489 FRMPD4Q14CM0 1322 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 SMCO2A6NFE2 343 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 KIF28PB7ZC32 967 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 RBAK-RBAKDNI3L0D1 243 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 ATP9AO75110 1047 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 LGALS2P05162 132 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 SMIM10L2AP0DMW4 78 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 SMIM10L2BP0DMW5 78 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 ADD1P35611 737 aaKnown RBP10.65□□□□□ -0.7
NUP50-206ENST00000422489 THPOP40225 353 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 ZNF618Q5T7W0 954 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 WWC2Q6AWC2 1192 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 METTL7BQ6UX53 244 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 GIMAP8Q8ND71 665 aaPredicted RBP10.65□□□□□ -0.7
NUP50-206ENST00000422489 BRF1Q92994 677 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 PGBD1Q96JS3 809 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 ZBED2Q9BTP6 218 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 RNPEPQ9H4A4 650 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 CERS4Q9HA82 394 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 SETD4Q9NVD3 440 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 TELO2Q9Y4R8 837 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 PCDHA11Q9Y5I1 949 aa10.65□□□□□ -0.7
NUP50-206ENST00000422489 SZT2Q5T011 3432 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 RSPH10B2B2RC85 870 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 TREHO43280 583 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 NBNO60934 754 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 REC8O95072 547 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 RSPH10BP0C881 870 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 GNAT1P11488 350 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 HOXD8P13378 290 aaPredicted RBP10.64□□□□□ -0.71
NUP50-206ENST00000422489 ITGB5P18084 799 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 CDC27P30260 824 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 HSPA4P34932 840 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 ZNF76P36508 570 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 METAP2P50579 478 aaKnown RBP eCLIP10.64□□□□□ -0.71
NUP50-206ENST00000422489 ADCY7P51828 1080 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 MTMR1Q13613 665 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 GPNMBQ14956 572 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 CCDC85BQ15834 202 aaPredicted RBP10.64□□□□□ -0.71
NUP50-206ENST00000422489 PPP2R2DQ66LE6 453 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 PHOSPHO2Q8TCD6 241 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 WNT8BQ93098 351 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 GPRASP2Q96D09 838 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 CDHR1Q96JP9 859 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 SLC9A7Q96T83 725 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 SENP7Q9BQF6 1050 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 JADE2Q9NQC1 790 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 FAM217BQ9NTX9 383 aaPredicted RBP10.64□□□□□ -0.71
NUP50-206ENST00000422489 TMEM260Q9NX78 707 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 ZNF215Q9UL58 517 aaPredicted RBP10.64□□□□□ -0.71
NUP50-206ENST00000422489 UBIAD1Q9Y5Z9 338 aa10.64□□□□□ -0.71
NUP50-206ENST00000422489 CNTNAP5Q8WYK1 1306 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 CCDC196A0A1B0GTZ2 297 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 GSTTP1A0A1W2PQM5 241 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 STXBP3O00186 592 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 RFXAPO00287 272 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 PARNO95453 639 aaKnown RBP10.63□□□□□ -0.71
NUP50-206ENST00000422489 CA3P07451 260 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 PSMA5P28066 241 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 TCF7P36402 384 aaPredicted RBP10.63□□□□□ -0.71
NUP50-206ENST00000422489 ARHGAP4P98171 946 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 FUT2Q10981 343 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 IKBKEQ14164 716 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 TRIM71Q2Q1W2 868 aaKnown RBP10.63□□□□□ -0.71
NUP50-206ENST00000422489 JAKMIP3Q5VZ66 844 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 TYW1BQ6NUM6 668 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 FAM117BQ6P1L5 589 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 CNKSR3Q6P9H4 555 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 TMCO2Q7Z6W1 182 aaPredicted RBP10.63□□□□□ -0.71
NUP50-206ENST00000422489 SERINC5Q86VE9 423 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 TRIM50Q86XT4 487 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 HERC6Q8IVU3 1022 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 SEPT1Q8WYJ6 367 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 GLG1Q92896 1179 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 KCNB2Q92953 911 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 MXRA8Q9BRK3 442 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 RIC8AQ9NPQ8 531 aa10.63□□□□□ -0.71
NUP50-206ENST00000422489 MAFGO15525 162 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 TLL1O43897 1013 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 PPFIA3O75145 1194 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 BAIAP3O94812 1187 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 FOSP01100 380 aaPredicted RBP10.62□□□□□ -0.71
NUP50-206ENST00000422489 KCNA2P16389 499 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 RPS6KB1P23443 525 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 MARK3P27448 753 aa10.62□□□□□ -0.71
NUP50-206ENST00000422489 AKAP17AQ02040 695 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms