RNA–Protein interactions for RNA: ENST00000417405.1

RUBCNL-207, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein like, humanhuman

TSL 3

Gene RUBCNL, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCNL-207ENST00000417405 COL11A1P12107 1806 aaPredicted RBP11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 PRC1O43663 620 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 EFCAB14O75071 495 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 PARP1P09874 1014 aaKnown RBP11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 ZNF543Q08ER8 600 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 NECTIN1Q15223 517 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 KIAA0319Q5VV43 1072 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 ASTLQ6HA08 431 aaPredicted RBP11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 STOX1Q6ZVD7 989 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 CATIPQ7Z7H3 387 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 MB21D2Q8IYB1 491 aaPredicted RBP11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 SMRP1Q8NCR6 262 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 TMEM87BQ96K49 555 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 RPGRIP1Q96KN7 1286 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 IGFLR1Q9H665 355 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 RAVER2Q9HCJ3 691 aaKnown RBP11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 FBXO40Q9UH90 709 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 PNMA2Q9UL42 364 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 PRR12Q9ULL5 1215 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 TAF6LQ9Y6J9 622 aa11.96□□□□□ -0.49
RUBCNL-207ENST00000417405 SCN5AQ14524 2016 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 CCDC69A6NI79 296 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 ATP2A1O14983 1001 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 NBNO60934 754 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 HMGB1P09429 215 aaKnown RBP11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 SNHG28P0DPA3 235 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 SLC16A2P36021 539 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 FGD1P98174 961 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 PURAQ00577 322 aaKnown RBP11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 COASYQ13057 564 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 IKBKEQ14164 716 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 FAM47CQ5HY64 1035 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 IQSEC1Q6DN90 963 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 NFRKBQ6P4R8 1299 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 CHST3Q7LGC8 479 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 FBXO11Q86XK2 927 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 AFAP1L1Q8TED9 768 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 NEK1Q96PY6 1258 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 MTA3Q9BTC8 594 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 HOMER2Q9NSB8 354 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 CLEC1BQ9P126 229 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 CCPG1Q9ULG6 757 aa11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 ZNFX1Q9P2E3 1918 aaKnown RBP11.95□□□□□ -0.5
RUBCNL-207ENST00000417405 EPB41L2O43491 1005 aaKnown RBP11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 GOLGA8HP0CJ92 632 aa11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 NDUFV1P49821 464 aa11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 ATXN1P54253 815 aaKnown RBP11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 SEC23AQ15436 765 aa11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 TKFCQ3LXA3 575 aa11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 TMEM63BQ5T3F8 832 aa11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 TTBK2Q6IQ55 1244 aa11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 SYNE3Q6ZMZ3 975 aa11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 TMTC2Q8N394 836 aa11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 CHST13Q8NET6 341 aa11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 ACAD9Q9H845 621 aa11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 POLR3EQ9NVU0 708 aa11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 SETXQ7Z333 2677 aaKnown RBP11.94□□□□□ -0.5
RUBCNL-207ENST00000417405 DDAH1O94760 285 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 PARNO95453 639 aaKnown RBP11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 ICAM1P05362 532 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 ALAS1P13196 640 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 SELPP16109 830 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 PSMA5P28066 241 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 KIF5BP33176 963 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 CLCN5P51795 746 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 ANTXR2P58335 489 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 SNAP25P60880 206 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 BTNL9Q6UXG8 535 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 ANKRD35Q8N283 1001 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 CTCFLQ8NI51 663 aaPredicted RBP11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 CAGE1Q8TC20 777 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 PPP1R13LQ8WUF5 828 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 JAKMIP1Q96N16 626 aaKnown RBP11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 LMAN2LQ9H0V9 348 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 RANBP17Q9H2T7 1088 aaKnown RBP11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 PDGFCQ9NRA1 345 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 RNF146Q9NTX7 359 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 USP15Q9Y4E8 981 aaPredicted RBP11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 TET1Q8NFU7 2136 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 SIP14410 1827 aa11.93□□□□□ -0.5
RUBCNL-207ENST00000417405 WDR19Q8NEZ3 1342 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 SH2B2O14492 632 aaPredicted RBP11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 ADRB1P08588 477 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 CALM1P0DP23 149 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 CALM2P0DP24 149 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 CALM3P0DP25 149 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 HSPA4P34932 840 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 PTPN11Q06124 597 aaPredicted RBP11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 ANGPT1Q15389 498 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 CDC37Q16543 378 aaPredicted RBP11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 TAPT1Q6NXT6 567 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 BLOC1S2Q6QNY1 142 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 LRRC8DQ7L1W4 858 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 ZBTB33Q86T24 672 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 UBALD2Q8IYN6 164 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 ZNF654Q8IZM8 581 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 TRERF1Q96PN7 1200 aa11.92□□□□□ -0.5
RUBCNL-207ENST00000417405 HINFPQ9BQA5 517 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms