RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.96■□□□□ 0.79
SHANK3-202ENST00000414786 C11orf96Q7Z7L8 435 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 KIF17Q9P2E2 1029 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 ZNF215Q9UL58 517 aaPredicted RBP19.96■□□□□ 0.79
SHANK3-202ENST00000414786 OR52Z1P0C646 297 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 RLBP1P12271 317 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 DYNLL1P63167 89 aaKnown RBP19.96■□□□□ 0.79
SHANK3-202ENST00000414786 NME3Q13232 169 aa19.96■□□□□ 0.79
SHANK3-202ENST00000414786 E2F5Q15329 346 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 GINM1Q9NU53 330 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 SEC24BO95487 1268 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 RXRBP28702 533 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 TWF2Q6IBS0 349 aaKnown RBP19.95■□□□□ 0.78
SHANK3-202ENST00000414786 THNSL1Q8IYQ7 743 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 CACTINQ8WUQ7 758 aaKnown RBP19.95■□□□□ 0.78
SHANK3-202ENST00000414786 ERO1AQ96HE7 468 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 USP26Q9BXU7 913 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 PLS3P13797 630 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 HDAC1Q13547 482 aaPredicted RBP19.95■□□□□ 0.78
SHANK3-202ENST00000414786 SGO2Q562F6 1265 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 RPF1Q9H9Y2 349 aaKnown RBP19.95■□□□□ 0.78
SHANK3-202ENST00000414786 IRF1P10914 325 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 MFSD4BQ5TF39 518 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 PDXDC2PQ6P474 469 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 TYW1Q9NV66 732 aaKnown RBP19.95■□□□□ 0.78
SHANK3-202ENST00000414786 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 MYO1EQ12965 1108 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 TAS2R42Q7RTR8 314 aa19.95■□□□□ 0.78
SHANK3-202ENST00000414786 BRD1O95696 1058 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 ADD1P35611 737 aaKnown RBP19.94■□□□□ 0.78
SHANK3-202ENST00000414786 MRPS25P82663 173 aaKnown RBP19.94■□□□□ 0.78
SHANK3-202ENST00000414786 SLC26A7Q8TE54 656 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 UBE2Q2Q8WVN8 375 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 ZMAT2Q96NC0 199 aaKnown RBP19.94■□□□□ 0.78
SHANK3-202ENST00000414786 SLC52A2Q9HAB3 445 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 GTSE1Q9NYZ3 720 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 SENP1Q9P0U3 644 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 CACNB3P54284 484 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 POU5F1BQ06416 359 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 CHRNDQ07001 517 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 EGFL8Q99944 293 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 CACNA2D2Q9NY47 1150 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 HPCAL4Q9UM19 191 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 UBA6A0AVT1 1052 aaPredicted RBP19.94■□□□□ 0.78
SHANK3-202ENST00000414786 DNAJC24Q6P3W2 148 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 WBP4O75554 376 aaKnown RBP19.94■□□□□ 0.78
SHANK3-202ENST00000414786 SLC27A3Q5K4L6 730 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 C1orf131Q8NDD1 294 aaKnown RBP19.94■□□□□ 0.78
SHANK3-202ENST00000414786 ASIC4Q96FT7 647 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 FSD1LQ9BXM9 530 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 SMYD3Q9H7B4 428 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 ATP8A1Q9Y2Q0 1164 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 RPN1P04843 607 aaKnown RBP19.94■□□□□ 0.78
SHANK3-202ENST00000414786 CATSPER4Q7RTX7 472 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 C6orf203Q9P0P8 240 aaPredicted RBP19.94■□□□□ 0.78
SHANK3-202ENST00000414786 COL4A3BPQ9Y5P4 624 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 NCAPD3P42695 1498 aa19.94■□□□□ 0.78
SHANK3-202ENST00000414786 E5RI56 91 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 AGR3Q8TD06 166 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 FAN1Q9Y2M0 1017 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 A0A087WWV3 80 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 CATSPER3Q86XQ3 398 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 SPON2Q9BUD6 331 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 IFNL3Q8IZI9 196 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 NGRNQ9NPE2 291 aaKnown RBP19.93■□□□□ 0.78
SHANK3-202ENST00000414786 DYRK4Q9NR20 520 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 LARSQ9P2J5 1176 aaKnown RBP19.93■□□□□ 0.78
SHANK3-202ENST00000414786 PLTPP55058 493 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 SUPT20HL1Q3ZLR7 823 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 TRIM4Q9C037 500 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 EIF4E1BA6NMX2 242 aaKnown RBP19.93■□□□□ 0.78
SHANK3-202ENST00000414786 TJAP1Q5JTD0 557 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 SYMPKQ92797 1274 aaKnown RBP19.93■□□□□ 0.78
SHANK3-202ENST00000414786 C2orf54Q08AI8 447 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 ATXN7L3BQ96GX2 97 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 HOMER3Q9NSC5 361 aa19.93■□□□□ 0.78
SHANK3-202ENST00000414786 IL16Q14005 1332 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 RSPH10B2B2RC85 870 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 RSPH10BP0C881 870 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 PNMA6EA0A0J9YXQ4 647 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 HDLBPQ00341 1268 aaKnown RBP19.92■□□□□ 0.78
SHANK3-202ENST00000414786 THEM5Q8N1Q8 247 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 MIS12Q9H081 205 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 PASKQ96RG2 1323 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 ZBTB7AO95365 584 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 NNMTP40261 264 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 TUBB4BP68371 445 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 CYP27A1Q02318 531 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 CTTNQ14247 550 aaKnown RBP19.92■□□□□ 0.78
SHANK3-202ENST00000414786 ZC4H2Q9NQZ6 224 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 HEY1Q9Y5J3 304 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 BBS9Q3SYG4 887 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 ATG16L1Q676U5 607 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 CCDC84Q86UT8 332 aaPredicted RBP19.92■□□□□ 0.78
SHANK3-202ENST00000414786 C2orf69Q8N8R5 385 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 ARHGAP25P42331 645 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 EPAS1Q99814 870 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 ANKRD36BQ8N2N9 1353 aa19.92■□□□□ 0.78
SHANK3-202ENST00000414786 LRRD1A4D1F6 860 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms