RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 PPP1R9BQ96SB3 815 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 TARS2Q9BW92 718 aaKnown RBP5.27□□□□□ -1.57
SF3B1-202ENST00000409915 OSBPL3Q9H4L5 887 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 ZFYVE28Q9HCC9 887 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 MYOZ2Q9NPC6 264 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 DBNLQ9UJU6 430 aaKnown RBP5.27□□□□□ -1.57
SF3B1-202ENST00000409915 HDAC9Q9UKV0 1011 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 TLR6Q9Y2C9 796 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 AKAP2Q9Y2D5 859 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 FRMD4BQ9Y2L6 1034 aa5.27□□□□□ -1.57
SF3B1-202ENST00000409915 MYO3BQ8WXR4 1341 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 CLRN2A0PK11 232 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 WNT10BO00744 389 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 RFPL1O75677 317 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 RFPL3O75679 317 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 ZIC2O95409 532 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-202ENST00000409915 POLR3DP05423 398 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-202ENST00000409915 EPB42P16452 691 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 MCAMP43121 646 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 SARSP49591 514 aaKnown RBP5.26□□□□□ -1.57
SF3B1-202ENST00000409915 DGKGP49619 791 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 VEGFBP49765 207 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 RBM5P52756 815 aaKnown RBP eCLIP5.26□□□□□ -1.57
SF3B1-202ENST00000409915 ERVK-9P63128 1117 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 GRM2Q14416 872 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 CFAP100Q494V2 611 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 TTC39AQ5SRH9 613 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 SH3PXD2AQ5TCZ1 1133 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 PRAMEF18Q5VWM3 479 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 TSHZ3Q63HK5 1081 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 SUGP1Q8IWZ8 645 aaKnown RBP5.26□□□□□ -1.57
SF3B1-202ENST00000409915 CNTROBQ8N137 903 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 PPHLN1Q8NEY8 458 aaKnown RBP5.26□□□□□ -1.57
SF3B1-202ENST00000409915 WDR66Q8TBY9 1149 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 ERP27Q96DN0 273 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 STRBPQ96SI9 672 aaKnown RBP5.26□□□□□ -1.57
SF3B1-202ENST00000409915 HERPUD2Q9BSE4 406 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 SARGQ9BW04 601 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 MUC3BQ9H195 1237 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 FAM13BQ9NYF5 915 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 HMG20BQ9P0W2 317 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 POLG2Q9UHN1 485 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 FBXO2Q9UK22 296 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-202ENST00000409915 NOL7Q9UMY1 257 aaKnown RBP5.26□□□□□ -1.57
SF3B1-202ENST00000409915 RABGAP1Q9Y3P9 1069 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 MAP4K5Q9Y4K4 846 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 CTDP1Q9Y5B0 961 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-202ENST00000409915 MYH13Q9UKX3 1938 aa5.26□□□□□ -1.57
SF3B1-202ENST00000409915 PASKQ96RG2 1323 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 TTC36A6NLP5 189 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 PRSS47A8MTI9 375 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 ERVH48-1M5A8F1 160 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 EML1O00423 815 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 PIP5K1CO60331 668 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 NBNO60934 754 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 PHACTR2O75167 634 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 FBXO24O75426 580 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 HSPA6P17066 643 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 RRM1P23921 792 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 MCM4P33991 863 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 MCM5P33992 734 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 LIG3P49916 1009 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 CACNB3P54284 484 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 FKBP1AP62942 108 aaKnown RBP5.25□□□□□ -1.57
SF3B1-202ENST00000409915 INSM1Q01101 510 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-202ENST00000409915 FSTL1Q12841 308 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 STRN3Q13033 797 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 CAMK2GQ13555 558 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-202ENST00000409915 MTFR1Q15390 333 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 DLGAP5Q15398 846 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 LONRF1Q17RB8 773 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 CNNM4Q6P4Q7 775 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 C6orf15Q6UXA7 325 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-202ENST00000409915 LHFPL2Q6ZUX7 228 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 VASH1Q7L8A9 365 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-202ENST00000409915 ZSCAN30Q86W11 494 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 ERC1Q8IUD2 1116 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 TRMT44Q8IYL2 757 aaKnown RBP5.25□□□□□ -1.57
SF3B1-202ENST00000409915 STK11IPQ8N1F8 1099 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 TTC30BQ8N4P2 665 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 SPATA5Q8NB90 893 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 C3orf58Q8NDZ4 430 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 OTUD7AQ8TE49 926 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-202ENST00000409915 ZNF669Q96BR6 464 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-202ENST00000409915 KIF1BPQ96EK5 621 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 ZBED3Q96IU2 234 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-202ENST00000409915 ELAC2Q9BQ52 826 aaKnown RBP5.25□□□□□ -1.57
SF3B1-202ENST00000409915 RHOBTB2Q9BYZ6 727 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 SUV39H2Q9H5I1 410 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 FBRSQ9HAH7 460 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 IFT122Q9HBG6 1241 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 VEZTQ9HBM0 779 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 GPR108Q9NPR9 543 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 RAI14Q9P0K7 980 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 ABCF2Q9UG63 623 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 EVLQ9UI08 416 aaPredicted RBP5.25□□□□□ -1.57
SF3B1-202ENST00000409915 DENND2AQ9ULE3 1009 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 HCN4Q9Y3Q4 1203 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 USP3Q9Y6I4 520 aa5.25□□□□□ -1.57
SF3B1-202ENST00000409915 SERTM1A2A2V5 107 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms