RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 RNF8O76064 485 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 UQCRFS1P1P0C7P4 283 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 ITGA6P23229 1130 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 CTNNA2P26232 953 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 MCM7P33993 719 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 DNM2P50570 870 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 PDE6CP51160 858 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 PPP2R2AP63151 447 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 SNX1Q13596 522 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 WTAPQ15007 396 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 PUM3Q15397 648 aaKnown RBP6.39□□□□□ -1.39
HDAC9-203ENST00000406072 USPL1Q5W0Q7 1092 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 GSTA5Q7RTV2 222 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 AMIGO3Q86WK7 504 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 SMYD4Q8IYR2 804 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-203ENST00000406072 RTFDC1Q9BY42 306 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-203ENST00000406072 ECT2Q9H8V3 914 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 NIP7Q9Y221 180 aaKnown RBP eCLIP6.39□□□□□ -1.39
HDAC9-203ENST00000406072 NDUFB9Q9Y6M9 179 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 CHD4Q14839 1912 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 ATP5J2-PTCD1G3V325 749 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 ATP2A1O14983 1001 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 PDE8BO95263 885 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 PARP1P09874 1014 aaKnown RBP6.39□□□□□ -1.39
HDAC9-203ENST00000406072 TROVE2P10155 538 aaKnown RBP eCLIP6.39□□□□□ -1.39
HDAC9-203ENST00000406072 RASSF7Q02833 373 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 BIRC3Q13489 604 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 RCN2Q14257 317 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 PSMD6Q15008 389 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 PLCB4Q15147 1175 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 OLFML2BQ68BL8 750 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 MFSD6Q6ZSS7 791 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 RSRC2Q7L4I2 434 aaKnown RBP6.39□□□□□ -1.39
HDAC9-203ENST00000406072 CATIPQ7Z7H3 387 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 GRAMD1CQ8IYS0 662 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 FMR1NBQ8N0W7 255 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-203ENST00000406072 SMC1BQ8NDV3 1235 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 LPIN2Q92539 896 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 MAP4K1Q92918 833 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 EAF2Q96CJ1 260 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-203ENST00000406072 EDC3Q96F86 508 aaKnown RBP6.39□□□□□ -1.39
HDAC9-203ENST00000406072 RNPC3Q96LT9 517 aaKnown RBP6.39□□□□□ -1.39
HDAC9-203ENST00000406072 SETDB2Q96T68 719 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 BRIP1Q9BX63 1249 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 L3MBTL1Q9Y468 752 aa6.39□□□□□ -1.39
HDAC9-203ENST00000406072 TARSL2A2RTX5 802 aaKnown RBP6.38□□□□□ -1.39
HDAC9-203ENST00000406072 MOCS3O95396 460 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 ZFXP17010 805 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-203ENST00000406072 POLD1P28340 1107 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 GRAPQ13588 217 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 NFIXQ14938 502 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 SLC15A2Q16348 729 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 PTGISQ16647 500 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 CCDC84Q86UT8 332 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-203ENST00000406072 CCDC105Q8IYK2 499 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 TEX9Q8N6V9 391 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 NSUN7Q8NE18 718 aaKnown RBP6.38□□□□□ -1.39
HDAC9-203ENST00000406072 MYCBPAPQ8TBZ2 947 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 GRAPLQ8TC17 118 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-203ENST00000406072 LBHD1Q9BQE6 289 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-203ENST00000406072 LRRC1Q9BTT6 524 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 POLR3EQ9NVU0 708 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 LRWD1Q9UFC0 647 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 ASIC3Q9UHC3 531 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 TCEAL9Q9UHQ7 104 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 GREB1LQ9C091 1923 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-203ENST00000406072 NAV1Q8NEY1 1877 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 ATP1A1P05023 1023 aaKnown RBP6.38□□□□□ -1.39
HDAC9-203ENST00000406072 KLHL30Q0D2K2 578 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 NME8Q8N427 588 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 KIF2BQ8N4N8 673 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 CYTH2Q99418 400 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 RAB34Q9BZG1 259 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 GREM2Q9H772 168 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 HELLSQ9NRZ9 838 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 LRP2BPQ9P2M1 347 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 DBNLQ9UJU6 430 aaKnown RBP6.38□□□□□ -1.39
HDAC9-203ENST00000406072 MAN1B1Q9UKM7 699 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 TAF1P21675 1872 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 FAM170AA1A519 330 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 MAP2K7O14733 419 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 TEX33O43247 280 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 TMOD1P28289 359 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 ABCD1P33897 745 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 RFC4P35249 363 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 RBM5P52756 815 aaKnown RBP eCLIP6.38□□□□□ -1.39
HDAC9-203ENST00000406072 PDE4DQ08499 809 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 PRR5LQ6MZQ0 368 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 RETREG2Q8NC44 543 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 RRP36Q96EU6 259 aaKnown RBP6.38□□□□□ -1.39
HDAC9-203ENST00000406072 BPIFA3Q9BQP9 254 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 MIS12Q9H081 205 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 XAB2Q9HCS7 855 aaKnown RBP6.38□□□□□ -1.39
HDAC9-203ENST00000406072 PAG1Q9NWQ8 432 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 THEGQ9P2T0 379 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 CHMP2BQ9UQN3 213 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 LEMD3Q9Y2U8 911 aa6.38□□□□□ -1.39
HDAC9-203ENST00000406072 TRAF5O00463 557 aa6.37□□□□□ -1.39
HDAC9-203ENST00000406072 RPS6KA5O75582 802 aa6.37□□□□□ -1.39
HDAC9-203ENST00000406072 ZNF189O75820 626 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms