RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 SDF4Q9BRK5 362 aa23.7■■□□□ 1.38
PDGFA-204ENST00000405692 PHF20Q9BVI0 1012 aa23.7■■□□□ 1.38
PDGFA-204ENST00000405692 BRMS1Q9HCU9 246 aa23.7■■□□□ 1.38
PDGFA-204ENST00000405692 F2P00734 622 aa23.69■■□□□ 1.38
PDGFA-204ENST00000405692 CD4P01730 458 aa23.69■■□□□ 1.38
PDGFA-204ENST00000405692 MAGEA10P43363 369 aaPredicted RBP23.69■■□□□ 1.38
PDGFA-204ENST00000405692 TRIM29Q14134 588 aa23.69■■□□□ 1.38
PDGFA-204ENST00000405692 KRT25Q7Z3Z0 450 aa23.69■■□□□ 1.38
PDGFA-204ENST00000405692 PLA2G4DQ86XP0 818 aa23.69■■□□□ 1.38
PDGFA-204ENST00000405692 CCDC83Q8IWF9 413 aa23.69■■□□□ 1.38
PDGFA-204ENST00000405692 GPR20Q99678 358 aa23.69■■□□□ 1.38
PDGFA-204ENST00000405692 GDF15Q99988 308 aa23.69■■□□□ 1.38
PDGFA-204ENST00000405692 KCNJ14Q9UNX9 436 aa23.69■■□□□ 1.38
PDGFA-204ENST00000405692 NFASCO94856 1347 aa23.68■■□□□ 1.38
PDGFA-204ENST00000405692 TRIM43BA6NCK2 446 aa23.68■■□□□ 1.38
PDGFA-204ENST00000405692 ATP9AO75110 1047 aa23.68■■□□□ 1.38
PDGFA-204ENST00000405692 FDPSP14324 419 aaKnown RBP23.68■■□□□ 1.38
PDGFA-204ENST00000405692 CIITAP33076 1130 aa23.68■■□□□ 1.38
PDGFA-204ENST00000405692 BMP8BP34820 402 aa23.68■■□□□ 1.38
PDGFA-204ENST00000405692 PSEN2P49810 448 aa23.68■■□□□ 1.38
PDGFA-204ENST00000405692 CHMP4BP1P59074 171 aa23.68■■□□□ 1.38
PDGFA-204ENST00000405692 HMGN5P82970 282 aaKnown RBP23.68■■□□□ 1.38
PDGFA-204ENST00000405692 SH3RF1Q7Z6J0 888 aa23.68■■□□□ 1.38
PDGFA-204ENST00000405692 CYP2W1Q8TAV3 490 aa23.68■■□□□ 1.38
PDGFA-204ENST00000405692 KAT2BQ92831 832 aa23.68■■□□□ 1.38
PDGFA-204ENST00000405692 TRIM43Q96BQ3 446 aaPredicted RBP23.68■■□□□ 1.38
PDGFA-204ENST00000405692 PKD2L1Q9P0L9 805 aa23.68■■□□□ 1.38
PDGFA-204ENST00000405692 ADAMTS3O15072 1205 aa23.67■■□□□ 1.38
PDGFA-204ENST00000405692 ZNF286BP0CG31 522 aa23.67■■□□□ 1.38
PDGFA-204ENST00000405692 MFSD10Q14728 455 aa23.67■■□□□ 1.38
PDGFA-204ENST00000405692 SESTD1Q86VW0 696 aa23.67■■□□□ 1.38
PDGFA-204ENST00000405692 C7orf31Q8N865 590 aa23.67■■□□□ 1.38
PDGFA-204ENST00000405692 SEPT1Q8WYJ6 367 aa23.67■■□□□ 1.38
PDGFA-204ENST00000405692 BCAS3Q9H6U6 928 aa23.67■■□□□ 1.38
PDGFA-204ENST00000405692 AGO4Q9HCK5 861 aaKnown RBP23.67■■□□□ 1.38
PDGFA-204ENST00000405692 JPH1Q9HDC5 661 aaPredicted RBP23.67■■□□□ 1.38
PDGFA-204ENST00000405692 TBX21Q9UL17 535 aa23.67■■□□□ 1.38
PDGFA-204ENST00000405692 ZNF215Q9UL58 517 aaPredicted RBP23.67■■□□□ 1.38
PDGFA-204ENST00000405692 COLQQ9Y215 455 aaPredicted RBP23.67■■□□□ 1.38
PDGFA-204ENST00000405692 CCDC194A0A1B0GVG4 234 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 A0A1W2PPC1 479 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 FAM86B1E9PN63 330 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 M0R2N6 131 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 B4GALT4O60513 344 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 LGALS2P05162 132 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 FAM86B2P0C5J1 330 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 ARP10275 920 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 MDM2Q00987 491 aaPredicted RBP23.66■■□□□ 1.38
PDGFA-204ENST00000405692 SP4Q02446 784 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 NONOQ15233 471 aaKnown RBP eCLIP23.66■■□□□ 1.38
PDGFA-204ENST00000405692 KIAA0753Q2KHM9 967 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 TBCKQ8TEA7 893 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 SLC9A2Q9UBY0 812 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 NOD1Q9Y239 953 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 MYH7BA7E2Y1 1941 aa23.66■■□□□ 1.38
PDGFA-204ENST00000405692 SCN10AQ9Y5Y9 1956 aa23.65■■□□□ 1.38
PDGFA-204ENST00000405692 IGLV3-22A0A075B6J6 115 aa23.65■■□□□ 1.38
PDGFA-204ENST00000405692 H3BRB1 525 aa23.65■■□□□ 1.38
PDGFA-204ENST00000405692 HAS3O00219 553 aa23.65■■□□□ 1.38
PDGFA-204ENST00000405692 JAK2O60674 1132 aa23.65■■□□□ 1.38
PDGFA-204ENST00000405692 TIMP1P01033 207 aa23.65■■□□□ 1.38
PDGFA-204ENST00000405692 NPY5RQ15761 445 aa23.65■■□□□ 1.38
PDGFA-204ENST00000405692 C16orf70Q9BSU1 422 aa23.65■■□□□ 1.38
PDGFA-204ENST00000405692 UBE2OQ9C0C9 1292 aaKnown RBP23.65■■□□□ 1.38
PDGFA-204ENST00000405692 TRPV6Q9H1D0 765 aa23.65■■□□□ 1.38
PDGFA-204ENST00000405692 TUT1Q9H6E5 874 aaKnown RBP23.65■■□□□ 1.38
PDGFA-204ENST00000405692 TCEAL9Q9UHQ7 104 aa23.65■■□□□ 1.38
PDGFA-204ENST00000405692 KRT2P35908 639 aa23.64■■□□□ 1.37
PDGFA-204ENST00000405692 TCF7P36402 384 aaPredicted RBP23.64■■□□□ 1.37
PDGFA-204ENST00000405692 ST3GAL1Q11201 340 aa23.64■■□□□ 1.37
PDGFA-204ENST00000405692 PRR16Q569H4 304 aa23.64■■□□□ 1.37
PDGFA-204ENST00000405692 BADQ92934 168 aa23.64■■□□□ 1.37
PDGFA-204ENST00000405692 ZNF577Q9BSK1 485 aa23.64■■□□□ 1.37
PDGFA-204ENST00000405692 TBC1D22BQ9NU19 505 aa23.64■■□□□ 1.37
PDGFA-204ENST00000405692 IPO5O00410 1097 aaKnown RBP23.63■■□□□ 1.37
PDGFA-204ENST00000405692 UTP14CQ5TAP6 766 aaKnown RBP23.63■■□□□ 1.37
PDGFA-204ENST00000405692 MOXD1Q6UVY6 613 aa23.63■■□□□ 1.37
PDGFA-204ENST00000405692 FAM184AQ8NB25 1140 aa23.63■■□□□ 1.37
PDGFA-204ENST00000405692 NAP1L4Q99733 375 aaKnown RBP23.63■■□□□ 1.37
PDGFA-204ENST00000405692 PRO3102Q9H379 93 aa23.63■■□□□ 1.37
PDGFA-204ENST00000405692 HIPK3Q9H422 1215 aa23.63■■□□□ 1.37
PDGFA-204ENST00000405692 TRMT13Q9NUP7 481 aaKnown RBP23.63■■□□□ 1.37
PDGFA-204ENST00000405692 GTF2IRD1Q9UHL9 959 aa23.63■■□□□ 1.37
PDGFA-204ENST00000405692 KIF3AQ9Y496 699 aa23.63■■□□□ 1.37
PDGFA-204ENST00000405692 DTNBO60941 627 aa23.62■■□□□ 1.37
PDGFA-204ENST00000405692 SAFBQ15424 915 aaKnown RBP eCLIP23.62■■□□□ 1.37
PDGFA-204ENST00000405692 PTGISQ16647 500 aa23.62■■□□□ 1.37
PDGFA-204ENST00000405692 MFSD5Q6N075 450 aa23.62■■□□□ 1.37
PDGFA-204ENST00000405692 TMEM199Q8N511 208 aa23.62■■□□□ 1.37
PDGFA-204ENST00000405692 SMARCAD1Q9H4L7 1026 aa23.62■■□□□ 1.37
PDGFA-204ENST00000405692 AZI2Q9H6S1 392 aa23.62■■□□□ 1.37
PDGFA-204ENST00000405692 GJB4Q9NTQ9 266 aa23.62■■□□□ 1.37
PDGFA-204ENST00000405692 HDAC6Q9UBN7 1215 aa23.62■■□□□ 1.37
PDGFA-204ENST00000405692 GSTTP1A0A1W2PQM5 241 aa23.61■■□□□ 1.37
PDGFA-204ENST00000405692 MMP1P03956 469 aa23.61■■□□□ 1.37
PDGFA-204ENST00000405692 FPGSQ05932 587 aa23.61■■□□□ 1.37
PDGFA-204ENST00000405692 ITGB3BPQ13352 177 aaPredicted RBP23.61■■□□□ 1.37
PDGFA-204ENST00000405692 KRT40Q6A162 431 aa23.61■■□□□ 1.37
PDGFA-204ENST00000405692 CCDC155Q8N6L0 562 aa23.61■■□□□ 1.37
PDGFA-204ENST00000405692 TNPO1Q92973 898 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms