RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 CDR1P51861 262 aa5.42□□□□□ -1.54
SMAD4-202ENST00000398417 IRX5P78411 483 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-202ENST00000398417 CCDC170Q8IYT3 715 aa5.42□□□□□ -1.54
SMAD4-202ENST00000398417 RETREG2Q8NC44 543 aa5.42□□□□□ -1.54
SMAD4-202ENST00000398417 ZNF507Q8TCN5 953 aa5.42□□□□□ -1.54
SMAD4-202ENST00000398417 PLCD4Q9BRC7 762 aa5.42□□□□□ -1.54
SMAD4-202ENST00000398417 MAGEF1Q9HAY2 307 aa5.42□□□□□ -1.54
SMAD4-202ENST00000398417 CLEC11AQ9Y240 323 aa5.42□□□□□ -1.54
SMAD4-202ENST00000398417 MED1Q15648 1581 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-202ENST00000398417 NKRFO15226 690 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 GFPT2O94808 682 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 TUBBP07437 444 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 PRPHP41219 470 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 CEP85LQ5SZL2 805 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 IPO4Q8TEX9 1081 aaKnown RBP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 LRRC15Q8TF66 581 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 TBC1D22AQ8WUA7 517 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 EXOC4Q96A65 974 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 HDAC9Q9UKV0 1011 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 CAPN6Q9Y6Q1 641 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 CAMTA1Q9Y6Y1 1673 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 RICTORQ6R327 1708 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 AFPP02771 609 aaKnown RBP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 H2AFZP0C0S5 128 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 C16orf86Q6ZW13 317 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 H2AFVQ71UI9 128 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 FNBP4Q8N3X1 1017 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 MTMR4Q9NYA4 1195 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 CTTNBP2NLQ9P2B4 639 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 POLLQ9UGP5 575 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 SLC9A1P19634 815 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 CRKP46108 304 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 PPFIA1Q13136 1202 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 NNTQ13423 1086 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 LRRC31Q6UY01 552 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 BARGINQ6ZT62 677 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 HDAC7Q8WUI4 952 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 NT5C3AQ9H0P0 336 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 HPCAL4Q9UM19 191 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 STK24Q9Y6E0 443 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 GPR75-ASB3A0A0A6YYF3 556 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 MYBP10242 640 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 LIG3P49916 1009 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 PAK2Q13177 524 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 CCDC84Q86UT8 332 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 VPS36Q86VN1 386 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 CAPS2Q9BXY5 557 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 SH2D4AQ9H788 454 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 TDRD3Q9H7E2 651 aaKnown RBP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 NFU1Q9UMS0 254 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 MICAL3Q7RTP6 2002 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 PPP1R12BO60237 982 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 EXOC3O60645 756 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 NR2F2P24468 414 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 NMT1P30419 496 aaKnown RBP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 TUBB4BP68371 445 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 SP4Q02446 784 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 CFAP221Q4G0U5 840 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 FAM83BQ5T0W9 1011 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 HAUS3Q68CZ6 603 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 LMBR1Q8WVP7 490 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 BCAS3Q9H6U6 928 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 DDX4Q9NQI0 724 aaKnown RBP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 FAM53CQ9NYF3 392 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 MRC1P22897 1456 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 GOLGA8IPA6NC78 632 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 GOLGA8JA6NMD2 632 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 ERLIN2O94905 339 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 TRIM37O94972 964 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 TTLL1O95922 423 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 SERPING1P05155 500 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 MYL1P05976 194 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 TRAPPC11Q7Z392 1133 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 OR2W6PQ8NHA6 318 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 TEKT1Q969V4 418 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 INTS2Q9H0H0 1204 aaKnown RBP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 GOLPH3Q9H4A6 298 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 CEP72Q9P209 647 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 hCG_1984214I3L0E3 225 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 PDE2AO00408 941 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 TRIM66O15016 1216 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 MED24O75448 989 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 FGRP09769 529 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 PPP4CP60510 307 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 PDCLQ13371 301 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 IFI16Q16666 785 aaKnown RBP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 MIIPQ5JXC2 388 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 IFT20Q8IY31 132 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 ZNF713Q8N859 430 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-202ENST00000398417 PCDHAC2Q9Y5I4 1007 aa5.41□□□□□ -1.54
SMAD4-202ENST00000398417 CACNA1FO60840 1977 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 MYH9P35579 1960 aaKnown RBP5.4□□□□□ -1.54
SMAD4-202ENST00000398417 KDM4FA0A1W2PPD8 638 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 MYO1CO00159 1063 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 YY1P25490 414 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 ZNF543Q08ER8 600 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 PSMD2Q13200 908 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 KIAA0753Q2KHM9 967 aa5.4□□□□□ -1.54
SMAD4-202ENST00000398417 SYDE2Q5VT97 1194 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms