RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 AMPD2Q01433 879 aa18.62■□□□□ 0.57
NUP50-202ENST00000396096 DLGAP5Q15398 846 aa18.62■□□□□ 0.57
NUP50-202ENST00000396096 WHAMMP3Q1A5X7 153 aa18.62■□□□□ 0.57
NUP50-202ENST00000396096 ARSHQ5FYA8 562 aa18.62■□□□□ 0.57
NUP50-202ENST00000396096 CATSPER3Q86XQ3 398 aa18.62■□□□□ 0.57
NUP50-202ENST00000396096 MTMR14Q8NCE2 650 aa18.62■□□□□ 0.57
NUP50-202ENST00000396096 COL4A3BPQ9Y5P4 624 aa18.62■□□□□ 0.57
NUP50-202ENST00000396096 MSH4O15457 936 aa18.61■□□□□ 0.57
NUP50-202ENST00000396096 PLA2G6O60733 806 aa18.61■□□□□ 0.57
NUP50-202ENST00000396096 SPATA31C1P0DKV0 1188 aa18.61■□□□□ 0.57
NUP50-202ENST00000396096 CHMP4BP1P59074 171 aa18.61■□□□□ 0.57
NUP50-202ENST00000396096 BMS1Q14692 1282 aaKnown RBP18.61■□□□□ 0.57
NUP50-202ENST00000396096 TEX35Q5T0J7 233 aa18.61■□□□□ 0.57
NUP50-202ENST00000396096 SYT2Q8N9I0 419 aaPredicted RBP18.61■□□□□ 0.57
NUP50-202ENST00000396096 EHBP1Q8NDI1 1231 aa18.61■□□□□ 0.57
NUP50-202ENST00000396096 VAV3Q9UKW4 847 aa18.61■□□□□ 0.57
NUP50-202ENST00000396096 ZBTB21Q9ULJ3 1066 aa18.61■□□□□ 0.57
NUP50-202ENST00000396096 POTEFA5A3E0 1075 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 POTEIP0CG38 1075 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 ECE1P42892 770 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 EN1Q05925 392 aaPredicted RBP18.6■□□□□ 0.57
NUP50-202ENST00000396096 KIAA1755Q5JYT7 1200 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 POTEGQ6S5H5 508 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 POTEEQ6S8J3 1075 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 PPP4R3CPQ6ZMV5 832 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 KRT222Q8N1A0 295 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 POLR3CQ9BUI4 534 aaPredicted RBP18.6■□□□□ 0.57
NUP50-202ENST00000396096 KCTD10Q9H3F6 313 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 CLRN2A0PK11 232 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 ATP8B1O43520 1251 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 EDRF1Q3B7T1 1238 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 HERC4Q5GLZ8 1057 aaPredicted RBP18.6■□□□□ 0.57
NUP50-202ENST00000396096 NCAPH2Q6IBW4 605 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 TMCO3Q6UWJ1 677 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 SPICE1Q8N0Z3 855 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 ACER1Q8TDN7 264 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 SCFD1Q8WVM8 642 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 FGFBP2Q9BYJ0 223 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 RANBP17Q9H2T7 1088 aaKnown RBP18.6■□□□□ 0.57
NUP50-202ENST00000396096 GUCA1BQ9UMX6 200 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 DNM3Q9UQ16 869 aa18.6■□□□□ 0.57
NUP50-202ENST00000396096 SMCHD1A6NHR9 2005 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 IGLV3-22A0A075B6J6 115 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 NPHP3-ACAD11A0A0J9YXS1 232 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 TRAF5O00463 557 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 KRT86O43790 486 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 RAD17O75943 681 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 IPO7O95373 1038 aaKnown RBP18.59■□□□□ 0.57
NUP50-202ENST00000396096 LCA5LO95447 670 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 CCDC122Q5T0U0 273 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 FAM83AQ86UY5 434 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 LARGE2Q8N3Y3 721 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 OGFOD1Q8N543 542 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 JAKMIP2Q96AA8 810 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 PURBQ96QR8 312 aaKnown RBP18.59■□□□□ 0.57
NUP50-202ENST00000396096 UIMC1Q96RL1 719 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 EMILIN3Q9NT22 766 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 TRIM10Q9UDY6 481 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 FHOD1Q9Y613 1164 aa18.59■□□□□ 0.57
NUP50-202ENST00000396096 EPHB6O15197 1021 aa18.58■□□□□ 0.57
NUP50-202ENST00000396096 ZSCAN20P17040 1043 aaPredicted RBP18.58■□□□□ 0.57
NUP50-202ENST00000396096 HOXA13P31271 388 aaPredicted RBP18.58■□□□□ 0.57
NUP50-202ENST00000396096 GIT2Q14161 759 aa18.58■□□□□ 0.57
NUP50-202ENST00000396096 KIAA1328Q86T90 577 aa18.58■□□□□ 0.57
NUP50-202ENST00000396096 CHURC1Q8WUH1 139 aa18.58■□□□□ 0.57
NUP50-202ENST00000396096 BAP1Q92560 729 aa18.58■□□□□ 0.57
NUP50-202ENST00000396096 POTEB2H3BUK9 544 aa18.58■□□□□ 0.56
NUP50-202ENST00000396096 KRT18P05783 430 aaKnown RBP18.58■□□□□ 0.56
NUP50-202ENST00000396096 TAL1P17542 331 aaPredicted RBP18.58■□□□□ 0.56
NUP50-202ENST00000396096 VAV2P52735 878 aa18.58■□□□□ 0.56
NUP50-202ENST00000396096 CCDC40Q4G0X9 1142 aa18.58■□□□□ 0.56
NUP50-202ENST00000396096 FAM83BQ5T0W9 1011 aa18.58■□□□□ 0.56
NUP50-202ENST00000396096 TRAPPC11Q7Z392 1133 aa18.58■□□□□ 0.56
NUP50-202ENST00000396096 TRIM59Q8IWR1 403 aa18.58■□□□□ 0.56
NUP50-202ENST00000396096 AGBL3Q8NEM8 1001 aa18.58■□□□□ 0.56
NUP50-202ENST00000396096 TSGA10Q9BZW7 698 aa18.58■□□□□ 0.56
NUP50-202ENST00000396096 VCPKMTQ9H867 229 aa18.58■□□□□ 0.56
NUP50-202ENST00000396096 MMRN2Q9H8L6 949 aa18.58■□□□□ 0.56
NUP50-202ENST00000396096 MYO6Q9UM54 1294 aa18.58■□□□□ 0.56
NUP50-202ENST00000396096 RBBP6Q7Z6E9 1792 aaKnown RBP18.58■□□□□ 0.56
NUP50-202ENST00000396096 KCNA3P22001 575 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 PSMC6P62333 389 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 MAP3K10Q02779 954 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 KCNMA1Q12791 1236 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 PAPD7Q5XG87 772 aaKnown RBP18.57■□□□□ 0.56
NUP50-202ENST00000396096 EPM2AIP1Q7L775 607 aaPredicted RBP18.57■□□□□ 0.56
NUP50-202ENST00000396096 FAM160B2Q86V87 743 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 MSANTD4Q8NCY6 345 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 NEK11Q8NG66 645 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 ZBED3Q96IU2 234 aaPredicted RBP18.57■□□□□ 0.56
NUP50-202ENST00000396096 CCDC42Q96M95 316 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 PARD6BQ9BYG5 372 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 SH2D4AQ9H788 454 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 FAM207AQ9NSI2 230 aaPredicted RBP18.57■□□□□ 0.56
NUP50-202ENST00000396096 TBC1D7Q9P0N9 293 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 ARHGAP20Q9P2F6 1191 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 FAM184BQ9ULE4 1060 aa18.57■□□□□ 0.56
NUP50-202ENST00000396096 PNMA6AP0CW24 399 aaPredicted RBP18.56■□□□□ 0.56
NUP50-202ENST00000396096 ZNF76P36508 570 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 PDXDC1Q6P996 788 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms