RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 ANKRD40Q6AI12 368 aa21.27■■□□□ 1
CLDND1-203ENST00000394181 TTI2Q6NXR4 508 aa21.27■■□□□ 1
CLDND1-203ENST00000394181 CNNM4Q6P4Q7 775 aa21.27■■□□□ 1
CLDND1-203ENST00000394181 ERMNQ8TAM6 284 aa21.27■■□□□ 1
CLDND1-203ENST00000394181 CCDC47Q96A33 483 aaKnown RBP21.27■■□□□ 1
CLDND1-203ENST00000394181 HSD17B14Q9BPX1 270 aa21.27■■□□□ 1
CLDND1-203ENST00000394181 FGFBP2Q9BYJ0 223 aa21.27■■□□□ 1
CLDND1-203ENST00000394181 UNC45AQ9H3U1 944 aa21.27■■□□□ 1
CLDND1-203ENST00000394181 KCNH7Q9NS40 1196 aa21.27■■□□□ 1
CLDND1-203ENST00000394181 IPO5O00410 1097 aaKnown RBP21.26■□□□□ 0.99
CLDND1-203ENST00000394181 FDX1P10109 184 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 EHHADHQ08426 723 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 PLS1Q14651 629 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 OTUD5Q96G74 571 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 RMDN3Q96TC7 470 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 POLD4Q9HCU8 107 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 ADD3Q9UEY8 706 aaKnown RBP21.26■□□□□ 0.99
CLDND1-203ENST00000394181 DDX39AO00148 427 aaKnown RBP21.26■□□□□ 0.99
CLDND1-203ENST00000394181 PSMA7O14818 248 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 SLITRK3O94933 977 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 CCZ1BP86790 482 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 CCZ1P86791 482 aaPredicted RBP21.26■□□□□ 0.99
CLDND1-203ENST00000394181 SEMA3FQ13275 785 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 PPP2R5CQ13362 524 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 PGM5Q15124 567 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 KRT31Q15323 416 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 DYDC2Q96IM9 177 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 SEMA6BQ9H3T3 888 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 TBC1D7Q9P0N9 293 aa21.26■□□□□ 0.99
CLDND1-203ENST00000394181 COL11A1P12107 1806 aaPredicted RBP21.26■□□□□ 0.99
CLDND1-203ENST00000394181 MYCLP12524 364 aaPredicted RBP21.25■□□□□ 0.99
CLDND1-203ENST00000394181 IREB2P48200 963 aaKnown RBP21.25■□□□□ 0.99
CLDND1-203ENST00000394181 STIM1Q13586 685 aa21.25■□□□□ 0.99
CLDND1-203ENST00000394181 TTLL12Q14166 644 aaPredicted RBP21.25■□□□□ 0.99
CLDND1-203ENST00000394181 NOLC1Q14978 699 aaKnown RBP eCLIP21.25■□□□□ 0.99
CLDND1-203ENST00000394181 TKFCQ3LXA3 575 aa21.25■□□□□ 0.99
CLDND1-203ENST00000394181 PCNX4Q63HM2 1172 aa21.25■□□□□ 0.99
CLDND1-203ENST00000394181 PIGOQ8TEQ8 1089 aa21.25■□□□□ 0.99
CLDND1-203ENST00000394181 DHTKD1Q96HY7 919 aaPredicted RBP21.25■□□□□ 0.99
CLDND1-203ENST00000394181 SRRTQ9BXP5 876 aaKnown RBP21.25■□□□□ 0.99
CLDND1-203ENST00000394181 TAF1DQ9H5J8 278 aaPredicted RBP21.25■□□□□ 0.99
CLDND1-203ENST00000394181 WRAP73Q9P2S5 460 aaPredicted RBP21.25■□□□□ 0.99
CLDND1-203ENST00000394181 DNM3Q9UQ16 869 aa21.25■□□□□ 0.99
CLDND1-203ENST00000394181 UBIAD1Q9Y5Z9 338 aa21.25■□□□□ 0.99
CLDND1-203ENST00000394181 POTEJP0CG39 1038 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 COASYQ13057 564 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 TCP11X2Q5H9J9 407 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 TPH2Q8IWU9 490 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 RBM46Q8TBY0 533 aaKnown RBP21.24■□□□□ 0.99
CLDND1-203ENST00000394181 P2RX5Q93086 422 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 POLR3CQ9BUI4 534 aaPredicted RBP21.24■□□□□ 0.99
CLDND1-203ENST00000394181 BCAS3Q9H6U6 928 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 PXMP2Q9NR77 195 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 PANK4Q9NVE7 773 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 HOXC10Q9NYD6 342 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 OTOFQ9HC10 1997 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 PAPPA2Q9BXP8 1791 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 KCNJ18B7U540 433 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 SLC26A4O43511 780 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 SKILP12757 684 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 ITGB3BPQ13352 177 aaPredicted RBP21.24■□□□□ 0.99
CLDND1-203ENST00000394181 KCNJ12Q14500 433 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 B3GNT9Q6UX72 402 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 ZC3H15Q8WU90 426 aaKnown RBP21.24■□□□□ 0.99
CLDND1-203ENST00000394181 TRIM47Q96LD4 638 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 LRRC27Q9C0I9 530 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 VPS16Q9H269 839 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 TAB2Q9NYJ8 693 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 FRMPD4Q14CM0 1322 aa21.24■□□□□ 0.99
CLDND1-203ENST00000394181 DHX15O43143 795 aaKnown RBP21.23■□□□□ 0.99
CLDND1-203ENST00000394181 CCNE1P24864 410 aa21.23■□□□□ 0.99
CLDND1-203ENST00000394181 GSDMDP57764 484 aa21.23■□□□□ 0.99
CLDND1-203ENST00000394181 SETQ01105 290 aaPredicted RBP21.23■□□□□ 0.99
CLDND1-203ENST00000394181 GADL1Q6ZQY3 521 aa21.23■□□□□ 0.99
CLDND1-203ENST00000394181 SYT2Q8N9I0 419 aaPredicted RBP21.23■□□□□ 0.99
CLDND1-203ENST00000394181 PDCD2LQ9BRP1 358 aa21.23■□□□□ 0.99
CLDND1-203ENST00000394181 BHMT2Q9H2M3 363 aa21.23■□□□□ 0.99
CLDND1-203ENST00000394181 MAP3K20Q9NYL2 800 aaKnown RBP21.23■□□□□ 0.99
CLDND1-203ENST00000394181 LIMA1Q9UHB6 759 aaKnown RBP21.23■□□□□ 0.99
CLDND1-203ENST00000394181 WDR90Q96KV7 1748 aa21.23■□□□□ 0.99
CLDND1-203ENST00000394181 NKRFO15226 690 aaKnown RBP eCLIP21.23■□□□□ 0.99
CLDND1-203ENST00000394181 OAZ1P54368 228 aa21.23■□□□□ 0.99
CLDND1-203ENST00000394181 ARHGEF16Q5VV41 709 aa21.23■□□□□ 0.99
CLDND1-203ENST00000394181 TEX13BQ9BXU2 312 aa21.23■□□□□ 0.99
CLDND1-203ENST00000394181 JADE2Q9NQC1 790 aa21.23■□□□□ 0.99
CLDND1-203ENST00000394181 LRRC10BA6NIK2 292 aa21.22■□□□□ 0.99
CLDND1-203ENST00000394181 TBX2Q13207 712 aaPredicted RBP21.22■□□□□ 0.99
CLDND1-203ENST00000394181 RUSC1Q9BVN2 902 aa21.22■□□□□ 0.99
CLDND1-203ENST00000394181 AGO4Q9HCK5 861 aaKnown RBP21.22■□□□□ 0.99
CLDND1-203ENST00000394181 BMP2KQ9NSY1 1161 aaPredicted RBP21.22■□□□□ 0.99
CLDND1-203ENST00000394181 PCDHA2Q9Y5H9 948 aa21.22■□□□□ 0.99
CLDND1-203ENST00000394181 ATP2A1O14983 1001 aa21.21■□□□□ 0.99
CLDND1-203ENST00000394181 ATP9AO75110 1047 aa21.21■□□□□ 0.99
CLDND1-203ENST00000394181 GIT2Q14161 759 aa21.21■□□□□ 0.99
CLDND1-203ENST00000394181 COBLL1Q53SF7 1204 aa21.21■□□□□ 0.99
CLDND1-203ENST00000394181 ANKRD13AQ8IZ07 590 aa21.21■□□□□ 0.99
CLDND1-203ENST00000394181 CSGALNACT2Q8N6G5 542 aa21.21■□□□□ 0.99
CLDND1-203ENST00000394181 TEKT3Q9BXF9 490 aa21.21■□□□□ 0.99
CLDND1-203ENST00000394181 BTBD7Q9P203 1132 aa21.21■□□□□ 0.99
CLDND1-203ENST00000394181 RABGAP1Q9Y3P9 1069 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms