RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 ATP5OP48047 213 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 RFX8Q6ZV50 586 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 METTL16Q86W50 562 aaKnown RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 MED10Q9BTT4 135 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 TEKT3Q9BXF9 490 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 AMNQ9BXJ7 453 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 NACA2Q9H009 215 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 INTS9Q9NV88 658 aaKnown RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 ADAM21Q9UKJ8 722 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 KDM3AQ9Y4C1 1321 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 CDC42BPAQ5VT25 1732 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 C21orf2O43822 256 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 CDC25BP30305 580 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 PEX3P56589 373 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 TUBB4BP68371 445 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 FKBP3Q00688 224 aaKnown RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 CDC37Q16543 378 aaPredicted RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 C10orf76Q5T2E6 689 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 CCDC62Q6P9F0 684 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 MSANTD4Q8NCY6 345 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 MCUQ8NE86 351 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 FAM71BQ8TC56 605 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 CEP170P1Q96L14 293 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 CALN1Q9BXU9 219 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 ABHD10Q9NUJ1 306 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 ODF2LQ9ULJ1 636 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 WDR17Q8IZU2 1322 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 CIB2O75838 187 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 FGGP02679 453 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 AFPP02771 609 aaKnown RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 GCLMP48507 274 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 LRRC14Q15048 493 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 MAN2A1Q16706 1144 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 ARHGAP27Q6ZUM4 889 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 FAM47EQ6ZV65 393 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 MB21D2Q8IYB1 491 aaPredicted RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 PPFIBP2Q8ND30 876 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 CHURC1Q8WUH1 139 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 FAM118BQ9BPY3 351 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 LARSQ9P2J5 1176 aaKnown RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 TPX2Q9ULW0 747 aaKnown RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 XDHP47989 1333 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 ZNF609O15014 1411 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 ATP1A1P05023 1023 aaKnown RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 ATF2P15336 505 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 MAPK4P31152 587 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 NUMBP49757 651 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 BFSP1Q12934 665 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 ATG9AQ7Z3C6 839 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 SPATA24Q86W54 205 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 SPIRE2Q8WWL2 714 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 DDX47Q9H0S4 455 aaKnown RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 RAB20Q9NX57 234 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 RWDD2AQ9UIY3 292 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 MYO1FO00160 1098 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 PRPF3O43395 683 aaKnown RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 SH3BP5O60239 455 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 PTPREP23469 700 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 ATP2B4P23634 1241 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 NSFP46459 744 aaKnown RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 SH2D3CQ8N5H7 860 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 FAM149B1Q96BN6 582 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 DAAM1Q9Y4D1 1078 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 TARBP1Q13395 1621 aaKnown RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 ATP7BP35670 1465 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 H0Y3Z8 333 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 TMEM191BP0C7N4 346 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 TRIM49P0CI25 452 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 TRIM49CP0CI26 452 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 ALDH1B1P30837 517 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 MAP2K2P36507 400 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 PDE1CQ14123 709 aaPredicted RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 SEPT2Q15019 361 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 TERF2Q15554 542 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 SGO2Q562F6 1265 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 ZWILCHQ9H900 591 aa5.43□□□□□ -1.54
LTN1-202ENST00000389194 QTRT2Q9H974 415 aaKnown RBP5.43□□□□□ -1.54
LTN1-202ENST00000389194 NLRP1Q9C000 1473 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 BASP1P80723 227 aaKnown RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 TMTC3Q6ZXV5 915 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 SRBD1Q8N5C6 995 aaKnown RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 NLRP4Q96MN2 994 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 EHD2Q9NZN4 543 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 AFG3L2Q9Y4W6 797 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 USH1CQ9Y6N9 552 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 ARHGEF5Q12774 1597 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 ZFYVE16Q7Z3T8 1539 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 PHLPP2Q6ZVD8 1323 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 CAPN9O14815 690 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 STAM2O75886 525 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 EEF1GP26641 437 aaKnown RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 E4F1Q66K89 784 aaPredicted RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 ALKBH5Q6P6C2 394 aaKnown RBP5.42□□□□□ -1.54
LTN1-202ENST00000389194 CYFIP1Q7L576 1253 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 SFR1Q86XK3 245 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 SLFN12Q8IYM2 578 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 SCYL3Q8IZE3 742 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 GOLGA5Q8TBA6 731 aa5.42□□□□□ -1.54
LTN1-202ENST00000389194 SCYL1Q96KG9 808 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms