RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 POLR3CQ9BUI4 534 aaPredicted RBP27.55■■■□□ 2
ECHDC3-201ENST00000379215 PORCNQ9H237 461 aa27.55■■■□□ 2
ECHDC3-201ENST00000379215 KBTBD4Q9NVX7 518 aa27.55■■■□□ 2
ECHDC3-201ENST00000379215 AFMP43652 599 aa27.54■■■□□ 2
ECHDC3-201ENST00000379215 PDE4DQ08499 809 aa27.54■■■□□ 2
ECHDC3-201ENST00000379215 SEMA3FQ13275 785 aa27.54■■■□□ 2
ECHDC3-201ENST00000379215 PNMA5Q96PV4 448 aa27.54■■■□□ 2
ECHDC3-201ENST00000379215 EFCC1Q9HA90 598 aa27.54■■■□□ 2
ECHDC3-201ENST00000379215 PCDHA5Q9Y5H7 936 aa27.54■■■□□ 2
ECHDC3-201ENST00000379215 ADGRA2Q96PE1 1338 aa27.54■■■□□ 2
ECHDC3-201ENST00000379215 B3GNT9Q6UX72 402 aa27.53■■■□□ 2
ECHDC3-201ENST00000379215 SPATA20Q8TB22 786 aa27.53■■■□□ 2
ECHDC3-201ENST00000379215 ZFP91Q96JP5 570 aaPredicted RBP27.53■■■□□ 2
ECHDC3-201ENST00000379215 GSDMAQ96QA5 445 aa27.53■■■□□ 2
ECHDC3-201ENST00000379215 NAT10Q9H0A0 1025 aaKnown RBP27.53■■■□□ 2
ECHDC3-201ENST00000379215 TUFT1Q9NNX1 390 aa27.53■■■□□ 2
ECHDC3-201ENST00000379215 SOWAHBA6NEL2 793 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 YY1P25490 414 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 NLRP12P59046 1061 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 REM2Q8IYK8 340 aaPredicted RBP27.52■■■□□ 2
ECHDC3-201ENST00000379215 LARP4BQ92615 738 aaKnown RBP27.52■■■□□ 2
ECHDC3-201ENST00000379215 UIMC1Q96RL1 719 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 ZFYVE28Q9HCC9 887 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 LCTP09848 1927 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 FOXN1O15353 648 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 ICAM3P32942 547 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 TM4SF4P48230 202 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 SARSP49591 514 aaKnown RBP27.52■■■□□ 2
ECHDC3-201ENST00000379215 KRT76Q01546 638 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 DPYDQ12882 1025 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 EPHA7Q15375 998 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 SV2BQ7L1I2 683 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 PLIN2Q99541 437 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 GRPEL1Q9HAV7 217 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 RMND1Q9NWS8 449 aa27.52■■■□□ 2
ECHDC3-201ENST00000379215 NOGQ13253 232 aa27.51■■□□□ 1.99
ECHDC3-201ENST00000379215 PAXIP1Q6ZW49 1069 aaPredicted RBP27.51■■□□□ 1.99
ECHDC3-201ENST00000379215 GRAMD1CQ8IYS0 662 aa27.51■■□□□ 1.99
ECHDC3-201ENST00000379215 RDM1Q8NG50 284 aa27.51■■□□□ 1.99
ECHDC3-201ENST00000379215 FAM200AQ8TCP9 573 aa27.51■■□□□ 1.99
ECHDC3-201ENST00000379215 RAD54LQ92698 747 aa27.51■■□□□ 1.99
ECHDC3-201ENST00000379215 ERCC4Q92889 916 aaPredicted RBP27.51■■□□□ 1.99
ECHDC3-201ENST00000379215 NUDT12Q9BQG2 462 aa27.51■■□□□ 1.99
ECHDC3-201ENST00000379215 EIF2AK1Q9BQI3 630 aaKnown RBP27.51■■□□□ 1.99
ECHDC3-201ENST00000379215 UNC45AQ9H3U1 944 aa27.51■■□□□ 1.99
ECHDC3-201ENST00000379215 CREBZFQ9NS37 354 aa27.51■■□□□ 1.99
ECHDC3-201ENST00000379215 ASTN1O14525 1302 aa27.5■■□□□ 1.99
ECHDC3-201ENST00000379215 NFASCO94856 1347 aa27.5■■□□□ 1.99
ECHDC3-201ENST00000379215 ASB14A6NK59 587 aa27.5■■□□□ 1.99
ECHDC3-201ENST00000379215 SPATA31C2B4DYI2 1134 aa27.5■■□□□ 1.99
ECHDC3-201ENST00000379215 DHX15O43143 795 aaKnown RBP27.5■■□□□ 1.99
ECHDC3-201ENST00000379215 ALDH1A1P00352 501 aa27.5■■□□□ 1.99
ECHDC3-201ENST00000379215 PRR29P0C7W0 189 aa27.5■■□□□ 1.99
ECHDC3-201ENST00000379215 SFNP31947 248 aa27.5■■□□□ 1.99
ECHDC3-201ENST00000379215 JAK3P52333 1124 aa27.5■■□□□ 1.99
ECHDC3-201ENST00000379215 ITGB3BPQ13352 177 aaPredicted RBP27.5■■□□□ 1.99
ECHDC3-201ENST00000379215 ANO6Q4KMQ2 910 aa27.5■■□□□ 1.99
ECHDC3-201ENST00000379215 CHMP2AO43633 222 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 TLR2O60603 784 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 PGK2P07205 417 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 CATSPER3Q86XQ3 398 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 ZNF784Q8NCA9 323 aaPredicted RBP27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 GTPBP4Q9BZE4 634 aaKnown RBP27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 RBSNQ9H1K0 784 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 KIAA1024Q9UPX6 916 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 POTEB3A0JP26 581 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 MED24O75448 989 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 ZNF746Q6NUN9 644 aaPredicted RBP27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 KCNV1Q6PIU1 500 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 POTEBQ6S5H4 581 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 MIER3Q7Z3K6 550 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 GPR142Q7Z601 462 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 PLEKHH3Q7Z736 793 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 ZNF467Q7Z7K2 595 aaPredicted RBP27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 GIMAP8Q8ND71 665 aaPredicted RBP27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 MORC4Q8TE76 937 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 CCDC47Q96A33 483 aaKnown RBP27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 HSD17B14Q9BPX1 270 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 BLOC1S4Q9NUP1 217 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 SLC5A4Q9NY91 659 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 DACH1Q9UI36 760 aa27.49■■□□□ 1.99
ECHDC3-201ENST00000379215 RASSF10A6NK89 507 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 EML1O00423 815 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 RGS20O76081 388 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 ADORA2AP29274 412 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 GRB14Q14449 540 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 MTRQ99707 1265 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 C7orf25Q9BPX7 421 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 SENP7Q9BQF6 1050 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 R3HDMLQ9H3Y0 253 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 PKD2L1Q9P0L9 805 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 CPA4Q9UI42 421 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 MAN1B1Q9UKM7 699 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 DNM3Q9UQ16 869 aa27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 DIS3Q9Y2L1 958 aaKnown RBP27.48■■□□□ 1.99
ECHDC3-201ENST00000379215 WDR64B1ANS9 1081 aa27.47■■□□□ 1.99
ECHDC3-201ENST00000379215 SPATA31C1P0DKV0 1188 aa27.47■■□□□ 1.99
ECHDC3-201ENST00000379215 TGFB3P10600 412 aa27.47■■□□□ 1.99
ECHDC3-201ENST00000379215 APLP1P51693 650 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms