RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 AFAP1L1Q8TED9 768 aa21.46■■□□□ 1.03
PCDH8-202ENST00000377942 KRIT1O00522 736 aa21.46■■□□□ 1.03
PCDH8-202ENST00000377942 GIMAP7Q8NHV1 300 aa21.46■■□□□ 1.03
PCDH8-202ENST00000377942 ODF2LQ9ULJ1 636 aa21.46■■□□□ 1.03
PCDH8-202ENST00000377942 ITPK1Q13572 414 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 MTMR1Q13613 665 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 SCYL2Q6P3W7 929 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 UNC13DQ70J99 1090 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 EEPD1Q7L9B9 569 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 IQCA1LA6NCM1 817 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 WDR64B1ANS9 1081 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 MAP7D3Q8IWC1 876 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 MYO1FO00160 1098 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 PRELPP51888 382 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 BRD3Q15059 726 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 SPP2Q13103 211 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 SLC16A10Q8TF71 515 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 MXD3Q9BW11 206 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 RNF146Q9NTX7 359 aa21.45■■□□□ 1.02
PCDH8-202ENST00000377942 ADGRB1O14514 1584 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 RIMS1Q86UR5 1692 aaKnown RBP21.44■■□□□ 1.02
PCDH8-202ENST00000377942 CLIC2O15247 247 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 ZSCAN20P17040 1043 aaPredicted RBP21.44■■□□□ 1.02
PCDH8-202ENST00000377942 CCDC6Q16204 474 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 SNRNP48Q6IEG0 339 aaKnown RBP21.44■■□□□ 1.02
PCDH8-202ENST00000377942 ZNF500O60304 480 aaPredicted RBP21.44■■□□□ 1.02
PCDH8-202ENST00000377942 ENTPD3O75355 529 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 MXI1P50539 228 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 SNAP25P60880 206 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 ARHGAP4P98171 946 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 CTTNQ14247 550 aaKnown RBP21.44■■□□□ 1.02
PCDH8-202ENST00000377942 HHIPL2Q6UWX4 724 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 P3H4Q92791 437 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 EEF2KMTQ96G04 330 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 CEP63Q96MT8 703 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 DAGLAQ9Y4D2 1042 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 NMT2O60551 498 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 TBC1D31Q96DN5 1066 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 K7ERI5 159 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 BUB1O43683 1085 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 LDHAP00338 332 aaKnown RBP21.44■■□□□ 1.02
PCDH8-202ENST00000377942 CALRP27797 417 aaKnown RBP21.44■■□□□ 1.02
PCDH8-202ENST00000377942 ZBED6P86452 979 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 PPFIA1Q13136 1202 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 MAP7D1Q3KQU3 841 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 NLRP7Q8WX94 980 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 APOL6Q9BWW8 343 aa21.44■■□□□ 1.02
PCDH8-202ENST00000377942 RAVER2Q9HCJ3 691 aaKnown RBP21.44■■□□□ 1.02
PCDH8-202ENST00000377942 FAM196BA6NMK8 535 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 U2AF2P26368 475 aaKnown RBP eCLIP21.43■■□□□ 1.02
PCDH8-202ENST00000377942 CHRNA5P30532 468 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 SEMA3FQ13275 785 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 QRICH1Q2TAL8 776 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 METTL23Q86XA0 190 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 RUNDC3BQ96NL0 473 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 TRERF1Q96PN7 1200 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 SFNP31947 248 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 DDIT3P35638 169 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 STYK1Q6J9G0 422 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 BBOF1Q8ND07 529 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 PVALEFA0A1B0GWK0 134 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 GBP1P32455 592 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 GAS2L3Q86XJ1 694 aa21.43■■□□□ 1.02
PCDH8-202ENST00000377942 OSBPL5Q9H0X9 879 aaPredicted RBP21.43■■□□□ 1.02
PCDH8-202ENST00000377942 DDX41Q9UJV9 622 aaKnown RBP21.43■■□□□ 1.02
PCDH8-202ENST00000377942 NEURL4Q96JN8 1562 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 NEDD9Q14511 834 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 PDIA6Q15084 440 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 FYB2Q5VWT5 728 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 CDC27P30260 824 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 HPDP32754 393 aaPredicted RBP21.42■■□□□ 1.02
PCDH8-202ENST00000377942 C10orf76Q5T2E6 689 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 CASC4Q6P4E1 433 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 PCIF1Q9H4Z3 704 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 USP17L15C9J2P7 530 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 USP17L13C9JLJ4 530 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 USP17L11C9JVI0 530 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 USP17L18D6R9N7 530 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 USP17L22D6RA61 530 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 USP17L17D6RBQ6 530 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 USP17L19D6RCP7 530 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 USP17L20D6RJB6 530 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 IFNB1P01574 187 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 VIMP08670 466 aaKnown RBP21.42■■□□□ 1.02
PCDH8-202ENST00000377942 AKR1B1P15121 316 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 USP17L24Q0WX57 530 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 USP17L6PQ6QN14 398 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 SRGAP1Q7Z6B7 1085 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 CCDC170Q8IYT3 715 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 CCT6BQ92526 530 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 SPZ1Q9BXG8 430 aa21.42■■□□□ 1.02
PCDH8-202ENST00000377942 IQGAP1P46940 1657 aa21.41■■□□□ 1.02
PCDH8-202ENST00000377942 MED7O43513 233 aa21.41■■□□□ 1.02
PCDH8-202ENST00000377942 USP11P51784 963 aa21.41■■□□□ 1.02
PCDH8-202ENST00000377942 DENND2CQ68D51 928 aa21.41■■□□□ 1.02
PCDH8-202ENST00000377942 SNX25Q9H3E2 840 aa21.41■■□□□ 1.02
PCDH8-202ENST00000377942 TFAMQ00059 246 aaKnown RBP21.41■■□□□ 1.02
PCDH8-202ENST00000377942 EXOSC10Q01780 885 aaKnown RBP21.41■■□□□ 1.02
PCDH8-202ENST00000377942 FBXO33Q7Z6M2 555 aa21.41■■□□□ 1.02
PCDH8-202ENST00000377942 ADGRF4Q8IZF3 695 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms