RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 FBXO33Q7Z6M2 555 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 SPATA20Q8TB22 786 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 ARHGEF1Q92888 912 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 HOMER2Q9NSB8 354 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 AFDNP55196 1824 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 EPB41P11171 864 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 SLC9A1P19634 815 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 TRADDQ15628 312 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 UNC13DQ70J99 1090 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PTPN22Q9Y2R2 807 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 IRAK1P51617 712 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 RCAN1P53805 252 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 NPY5RQ15761 445 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 MSL1Q68DK7 614 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PCIF1Q9H4Z3 704 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 CD209Q9NNX6 404 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 CTTNBP2NLQ9P2B4 639 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 ANAPC4Q9UJX5 808 aa15.78■□□□□ 0.12
TNFRSF1B-201ENST00000376259 TOPAZ1Q8N9V7 1692 aa15.77■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PBX1P40424 430 aa15.77■□□□□ 0.12
TNFRSF1B-201ENST00000376259 KCNH2Q12809 1159 aa15.77■□□□□ 0.12
TNFRSF1B-201ENST00000376259 ALKBH5Q6P6C2 394 aaKnown RBP15.77■□□□□ 0.12
TNFRSF1B-201ENST00000376259 HS2ST1Q7LGA3 356 aa15.77■□□□□ 0.12
TNFRSF1B-201ENST00000376259 PPP1R1BQ9UD71 204 aaPredicted RBP15.77■□□□□ 0.12
TNFRSF1B-201ENST00000376259 TNFAIP3P21580 790 aa15.77■□□□□ 0.11
TNFRSF1B-201ENST00000376259 MICALCLQ6ZW33 695 aa15.77■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CPXCR1Q8N123 301 aa15.77■□□□□ 0.11
TNFRSF1B-201ENST00000376259 HNRNPLLQ8WVV9 542 aaKnown RBP15.77■□□□□ 0.11
TNFRSF1B-201ENST00000376259 LZTS2Q9BRK4 669 aa15.77■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SH2D4AQ9H788 454 aa15.77■□□□□ 0.11
TNFRSF1B-201ENST00000376259 KBTBD4Q9NVX7 518 aa15.77■□□□□ 0.11
TNFRSF1B-201ENST00000376259 AMACRQ9UHK6 382 aa15.77■□□□□ 0.11
TNFRSF1B-201ENST00000376259 HDAC9Q9UKV0 1011 aa15.77■□□□□ 0.11
TNFRSF1B-201ENST00000376259 NOVA2Q9UNW9 492 aaKnown RBP15.77■□□□□ 0.11
TNFRSF1B-201ENST00000376259 PLAAQ9Y263 795 aa15.77■□□□□ 0.11
TNFRSF1B-201ENST00000376259 A0A087X0T9 212 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 FAM228BP0C875 321 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 MAP2K1Q02750 393 aaPredicted RBP15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CTTNQ14247 550 aaKnown RBP15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 ZIM3Q96PE6 472 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 DNAJC7Q99615 494 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 KCNK9Q9NPC2 374 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 RAB21Q9UL25 225 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 EXOC3O60645 756 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 KCNB1Q14721 858 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 PNMA8AQ86V59 439 aaPredicted RBP15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 VEZTQ9HBM0 779 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SERPINB13Q9UIV8 391 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 H2AFZP0C0S5 128 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 FAM153BP0C7A2 387 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 NR1D1P20393 614 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 FAM153CQ494X1 144 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 H2AFVQ71UI9 128 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SFR1Q86XK3 245 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GIMAP7Q8NHV1 300 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 FAM153AQ9UHL3 310 aa15.76■□□□□ 0.11
TNFRSF1B-201ENST00000376259 PLTPP55058 493 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GRB10Q13322 594 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 E2F5Q15329 346 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 ZNF746Q6NUN9 644 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 TSEN2Q8NCE0 465 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 RAD54LQ92698 747 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 MTA3Q9BTC8 594 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 MLXIPLQ9NP71 852 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 RGL1Q9NZL6 768 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 COL5A2P05997 1499 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 FRMD3A2A2Y4 597 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 FLOT1O75955 427 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GLI1P08151 1106 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 IFI16Q16666 785 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 ADGRF4Q8IZF3 695 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CCDC127Q96BQ5 260 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 LRRC37A3O60309 1634 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GOLGA8KD6RF30 607 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 LAD1O00515 517 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 KLRC4O43908 158 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 TMOD1P28289 359 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 PPP1R2P41236 205 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 MAGEA9P43362 315 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GPSM2P81274 684 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 DHX9Q08211 1270 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SLFN13Q68D06 897 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GALNT17Q6IS24 598 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CAPN12Q6ZSI9 719 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CELF4Q9BZC1 486 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GCNT4Q9P109 453 aa15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SCAF8Q9UPN6 1271 aaKnown RBP15.75■□□□□ 0.11
TNFRSF1B-201ENST00000376259 ZNF263O14978 683 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 NEFHP12036 1026 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 TADA2BQ86TJ2 420 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 CUEDC2Q9H467 287 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SPOPO43791 374 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 STAT1P42224 750 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 ELOA2Q8IYF1 753 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 GOLGA6L10A0A0M3HER8 536 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 LRRC10BA6NIK2 292 aa15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 SYF2O95926 243 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1B-201ENST00000376259 TRIM49P0CI25 452 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms