RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 PPP6R2O75170 966 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 SLCO1A2P46721 670 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 TBC1D10CQ8IV04 446 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 METTL14Q9HCE5 456 aaKnown RBP18.63■□□□□ 0.57
MCF2L-203ENST00000375604 IREB2P48200 963 aaKnown RBP18.63■□□□□ 0.57
MCF2L-203ENST00000375604 NFX1Q12986 1120 aaKnown RBP18.63■□□□□ 0.57
MCF2L-203ENST00000375604 WHAMMP3Q1A5X7 153 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 RNF207Q6ZRF8 634 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 RSPH3Q86UC2 560 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 PAGE5Q96GU1 130 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 ATG3Q9NT62 314 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 IRAK4Q9NWZ3 460 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 ZHX2Q9Y6X8 837 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 PSDA5PKW4 1024 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-203ENST00000375604 SPDYE2BA6NHP3 402 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 SPDYE6P0CI01 402 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 CYP4F22Q6NT55 531 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 FAM114A2Q9NRY5 505 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 BSDC1Q9NW68 430 aaPredicted RBP18.63■□□□□ 0.57
MCF2L-203ENST00000375604 CCDC68Q9H2F9 335 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 RBM6P78332 1123 aaKnown RBP18.63■□□□□ 0.57
MCF2L-203ENST00000375604 TMTC4Q5T4D3 741 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 RASSF4Q9H2L5 321 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 STAP2Q9UGK3 403 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 KCNG1Q9UIX4 513 aa18.63■□□□□ 0.57
MCF2L-203ENST00000375604 PSAPP07602 524 aa18.62■□□□□ 0.57
MCF2L-203ENST00000375604 RBBP5Q15291 538 aaKnown RBP18.62■□□□□ 0.57
MCF2L-203ENST00000375604 MAGOHBQ96A72 148 aaKnown RBP18.62■□□□□ 0.57
MCF2L-203ENST00000375604 MASTLQ96GX5 879 aa18.62■□□□□ 0.57
MCF2L-203ENST00000375604 RMDN2Q96LZ7 410 aa18.62■□□□□ 0.57
MCF2L-203ENST00000375604 CACYBPQ9HB71 228 aaKnown RBP18.62■□□□□ 0.57
MCF2L-203ENST00000375604 ADD3Q9UEY8 706 aaKnown RBP18.62■□□□□ 0.57
MCF2L-203ENST00000375604 AFF2P51816 1311 aa18.62■□□□□ 0.57
MCF2L-203ENST00000375604 MYO1FO00160 1098 aa18.62■□□□□ 0.57
MCF2L-203ENST00000375604 EMILIN3Q9NT22 766 aa18.62■□□□□ 0.57
MCF2L-203ENST00000375604 ZNF215Q9UL58 517 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-203ENST00000375604 G3BP2Q9UN86 482 aaKnown RBP18.62■□□□□ 0.57
MCF2L-203ENST00000375604 H0YCG3 227 aa18.62■□□□□ 0.57
MCF2L-203ENST00000375604 XPAP23025 273 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-203ENST00000375604 DARS2Q6PI48 645 aaKnown RBP18.62■□□□□ 0.57
MCF2L-203ENST00000375604 GDAQ9Y2T3 454 aa18.62■□□□□ 0.57
MCF2L-203ENST00000375604 EN1Q05925 392 aaPredicted RBP18.62■□□□□ 0.57
MCF2L-203ENST00000375604 SLC27A3Q5K4L6 730 aa18.62■□□□□ 0.57
MCF2L-203ENST00000375604 BASP1P80723 227 aaKnown RBP18.62■□□□□ 0.57
MCF2L-203ENST00000375604 TMED2Q15363 201 aa18.62■□□□□ 0.57
MCF2L-203ENST00000375604 THNSL1Q8IYQ7 743 aa18.62■□□□□ 0.57
MCF2L-203ENST00000375604 POTEMA6NI47 508 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 USP17L15C9J2P7 530 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 USP17L13C9JLJ4 530 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 USP17L11C9JVI0 530 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 USP17L18D6R9N7 530 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 USP17L22D6RA61 530 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 USP17L17D6RBQ6 530 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 USP17L19D6RCP7 530 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 USP17L20D6RJB6 530 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 TROVE2P10155 538 aaKnown RBP eCLIP18.61■□□□□ 0.57
MCF2L-203ENST00000375604 USP17L24Q0WX57 530 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 JADE1Q6IE81 842 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 USP17L6PQ6QN14 398 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 CELF1Q92879 486 aaKnown RBP18.61■□□□□ 0.57
MCF2L-203ENST00000375604 NACC1Q96RE7 527 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 WDR91A4D1P6 747 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 RCN2Q14257 317 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 WRNIP1Q96S55 665 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 MSTO1Q9BUK6 570 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 STAT3P40763 770 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 MCTP2Q6DN12 878 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 KDM5CP41229 1560 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 POLR2BP30876 1174 aaKnown RBP18.61■□□□□ 0.57
MCF2L-203ENST00000375604 GPSM2P81274 684 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 PDE11AQ9HCR9 933 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 USP17L10C9JJH3 530 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 CYP27B1O15528 508 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 DNAAF3Q8N9W5 541 aa18.61■□□□□ 0.57
MCF2L-203ENST00000375604 TSR3Q9UJK0 312 aaKnown RBP18.61■□□□□ 0.57
MCF2L-203ENST00000375604 PNMA6FA0A0J9YX94 578 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 RWDD4Q6NW29 188 aaKnown RBP18.6■□□□□ 0.57
MCF2L-203ENST00000375604 GDAP1Q8TB36 358 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 NHEJ1Q9H9Q4 299 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-203ENST00000375604 SYNMO15061 1565 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 CYP2E1P05181 493 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-203ENST00000375604 KIF11P52732 1056 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 PPFIA1Q13136 1202 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 OXER1Q8TDS5 423 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 VCX3BQ9H321 246 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 EPB41L5Q9HCM4 733 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 LMNB1P20700 586 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 PDZD4Q76G19 769 aaPredicted RBP18.6■□□□□ 0.57
MCF2L-203ENST00000375604 EXT2Q93063 718 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 PCDHA6Q9UN73 950 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 PCDHA8Q9Y5H6 950 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 ABCC12Q96J65 1359 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 NEO1Q92859 1461 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 TRIM49BA6NDI0 452 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 PLTPP55058 493 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 IRX4P78413 519 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 SGO2Q562F6 1265 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 PIM2Q9P1W9 311 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 ATP7BP35670 1465 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 PDE1BQ01064 536 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms