RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 ATRIPQ8WXE1 791 aa20■□□□□ 0.79
CD40-201ENST00000372276 DEF6Q9H4E7 631 aa20■□□□□ 0.79
CD40-201ENST00000372276 MMRN2Q9H8L6 949 aa20■□□□□ 0.79
CD40-201ENST00000372276 ANKZF1Q9H8Y5 726 aa20■□□□□ 0.79
CD40-201ENST00000372276 CEP72Q9P209 647 aa20■□□□□ 0.79
CD40-201ENST00000372276 JRKLQ9Y4A0 524 aa20■□□□□ 0.79
CD40-201ENST00000372276 TARSL2A2RTX5 802 aaKnown RBP19.99■□□□□ 0.79
CD40-201ENST00000372276 USP17L15C9J2P7 530 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 USP17L13C9JLJ4 530 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 USP17L11C9JVI0 530 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 USP17L18D6R9N7 530 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 USP17L22D6RA61 530 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 USP17L17D6RBQ6 530 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 USP17L19D6RCP7 530 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 USP17L20D6RJB6 530 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 KRT18P05783 430 aaKnown RBP19.99■□□□□ 0.79
CD40-201ENST00000372276 USP17L24Q0WX57 530 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 MAP9Q49MG5 647 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 HERC4Q5GLZ8 1057 aaPredicted RBP19.99■□□□□ 0.79
CD40-201ENST00000372276 USP17L6PQ6QN14 398 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 CACNA2D4Q7Z3S7 1137 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 ZFPM1Q8IX07 1006 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 CCDC155Q8N6L0 562 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 ALS2CR12Q96Q35 445 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 EHMT1Q9H9B1 1298 aa19.99■□□□□ 0.79
CD40-201ENST00000372276 CETN3O15182 167 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 MUTP22033 750 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 ITIH3Q06033 890 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 TCP10Q12799 353 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 RNF10Q8N5U6 811 aaKnown RBP19.98■□□□□ 0.79
CD40-201ENST00000372276 ETNPPLQ8TBG4 499 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 HPS3Q969F9 1004 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 POLR3CQ9BUI4 534 aaPredicted RBP19.98■□□□□ 0.79
CD40-201ENST00000372276 FUT8Q9BYC5 575 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 IFIH1Q9BYX4 1025 aaKnown RBP19.98■□□□□ 0.79
CD40-201ENST00000372276 TANGO6Q9C0B7 1094 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 ARHGEF10LQ9HCE6 1279 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 EMILIN3Q9NT22 766 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 TSKSQ9UJT2 592 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 PCDHA2Q9Y5H9 948 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 ADAMTSL1Q8N6G6 1762 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 MAP2K7O14733 419 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 PJA2O43164 708 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 AKR1B10O60218 316 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 NDUFB10O96000 172 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 SSBP05455 408 aaKnown RBP eCLIP19.98■□□□□ 0.79
CD40-201ENST00000372276 CYP11B2P19099 503 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 ECM1Q16610 540 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 PDXDC1Q6P996 788 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 SH3BP5LQ7L8J4 393 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 SIAH1Q8IUQ4 282 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 SYT2Q8N9I0 419 aaPredicted RBP19.98■□□□□ 0.79
CD40-201ENST00000372276 PCDHA13Q9Y5I0 950 aa19.98■□□□□ 0.79
CD40-201ENST00000372276 RAD21O60216 631 aa19.97■□□□□ 0.79
CD40-201ENST00000372276 KIF11P52732 1056 aa19.97■□□□□ 0.79
CD40-201ENST00000372276 SLC12A3P55017 1021 aa19.97■□□□□ 0.79
CD40-201ENST00000372276 IKQ13123 557 aaPredicted RBP19.97■□□□□ 0.79
CD40-201ENST00000372276 SLC9C1Q4G0N8 1177 aa19.97■□□□□ 0.79
CD40-201ENST00000372276 ZNF771Q7L3S4 317 aaPredicted RBP19.97■□□□□ 0.79
CD40-201ENST00000372276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.97■□□□□ 0.79
CD40-201ENST00000372276 E9PMD0 336 aa19.96■□□□□ 0.79
CD40-201ENST00000372276 CALUO43852 315 aaPredicted RBP19.96■□□□□ 0.79
CD40-201ENST00000372276 ABL1P00519 1130 aa19.96■□□□□ 0.79
CD40-201ENST00000372276 KLK7P49862 253 aa19.96■□□□□ 0.79
CD40-201ENST00000372276 SMC1AQ14683 1233 aaKnown RBP19.96■□□□□ 0.79
CD40-201ENST00000372276 BEND6Q5SZJ8 279 aaPredicted RBP19.96■□□□□ 0.79
CD40-201ENST00000372276 RRAGAQ7L523 313 aa19.96■□□□□ 0.79
CD40-201ENST00000372276 FRMD5Q7Z6J6 570 aa19.96■□□□□ 0.79
CD40-201ENST00000372276 TRIM59Q8IWR1 403 aa19.96■□□□□ 0.79
CD40-201ENST00000372276 BAP1Q92560 729 aa19.96■□□□□ 0.79
CD40-201ENST00000372276 PDGFDQ9GZP0 370 aaPredicted RBP19.96■□□□□ 0.79
CD40-201ENST00000372276 ZSWIM4Q9H7M6 989 aa19.96■□□□□ 0.79
CD40-201ENST00000372276 FAM207AQ9NSI2 230 aaPredicted RBP19.96■□□□□ 0.79
CD40-201ENST00000372276 TRAF3IP3Q9Y228 551 aa19.96■□□□□ 0.79
CD40-201ENST00000372276 ZNF646O15015 1829 aaPredicted RBP19.96■□□□□ 0.79
CD40-201ENST00000372276 ATAD5Q96QE3 1844 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 RBAK-RBAKDNI3L0D1 243 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 PLA2G6O60733 806 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 SERPING1P05155 500 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 GAP43P17677 238 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 RPL13P26373 211 aaKnown RBP19.95■□□□□ 0.78
CD40-201ENST00000372276 SPIRE1Q08AE8 756 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 PRR16Q569H4 304 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 SFMBT2Q5VUG0 894 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 KCTD10Q9H3F6 313 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 SH2D4AQ9H788 454 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 METTL14Q9HCE5 456 aaKnown RBP19.95■□□□□ 0.78
CD40-201ENST00000372276 GOPCQ9HD26 462 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 ARHGAP20Q9P2F6 1191 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 RNF14Q9UBS8 474 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 RABGAP1Q9Y3P9 1069 aa19.95■□□□□ 0.78
CD40-201ENST00000372276 POTEB3A0JP26 581 aa19.94■□□□□ 0.78
CD40-201ENST00000372276 POTECB2RU33 542 aa19.94■□□□□ 0.78
CD40-201ENST00000372276 PDXKO00764 312 aa19.94■□□□□ 0.78
CD40-201ENST00000372276 SEC31AO94979 1220 aaKnown RBP19.94■□□□□ 0.78
CD40-201ENST00000372276 TCP1P17987 556 aaKnown RBP19.94■□□□□ 0.78
CD40-201ENST00000372276 ANXA13P27216 316 aa19.94■□□□□ 0.78
CD40-201ENST00000372276 EIF4A3P38919 411 aaKnown RBP19.94■□□□□ 0.78
CD40-201ENST00000372276 EPS15P42566 896 aa19.94■□□□□ 0.78
CD40-201ENST00000372276 USP14P54578 494 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms