RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 ARHGAP27Q6ZUM4 889 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 CTAGE3PQ8IX95 158 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 NLGN1Q8N2Q7 840 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 ADAM33Q9BZ11 813 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 SAMD15Q9P1V8 674 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 BCL9O00512 1426 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 ATP2A1O14983 1001 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 ACTN4O43707 911 aaKnown RBP9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 RPS6KA4O75676 772 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 NF2P35240 595 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 KIF11P52732 1056 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 IRX3P78415 501 aaPredicted RBP9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 GPSM2P81274 684 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 ST3GAL1Q11201 340 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 WHAMMP3Q1A5X7 153 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 CASC4Q6P4E1 433 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 FAM186BQ8IYM0 893 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 DEPTORQ8TB45 409 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 RABGGTAQ92696 567 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 ZNF653Q96CK0 615 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 VPS37BQ9H9H4 285 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 TBK1Q9UHD2 729 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 STK38LQ9Y2H1 464 aa9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 ZBTB12Q9Y330 459 aaPredicted RBP9.96□□□□□ -0.82
SMARCA1-202ENST00000371122 ZNF831Q5JPB2 1677 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 CD58P19256 250 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 PPP1R2P41236 205 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 LIG4P49917 911 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 FXR1P51114 621 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 GABPB1Q06547 395 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 AOC3Q16853 763 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 GADL1Q6ZQY3 521 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 CLEC17AQ6ZS10 378 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 ILDR1Q86SU0 546 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 UBL4BQ8N7F7 174 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 HOOK2Q96ED9 719 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 CCDC51Q96ER9 411 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 MMS19Q96T76 1030 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 MAK16Q9BXY0 300 aaKnown RBP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 TMEM60Q9H2L4 133 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 GOLPH3Q9H4A6 298 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 RGL1Q9NZL6 768 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 BAIAP2L1Q9UHR4 511 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 SBF2Q86WG5 1849 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 GOLGA8SH3BPF8 625 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 ZNF185O15231 689 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 SLURP2P0DP57 97 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 PFKFB3Q16875 520 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 CYP4F22Q6NT55 531 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 MB21D1Q8N884 522 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 KIFAP3Q92845 792 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 MAGOHBQ96A72 148 aaKnown RBP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 ANO3Q9BYT9 981 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 AZI2Q9H6S1 392 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 GCNT4Q9P109 453 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 CHORDC1Q9UHD1 332 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 BBOX1O75936 387 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 TAL1P17542 331 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 DYNLT1P63172 113 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 ZNF211Q13398 564 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 BRD3Q15059 726 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 ANKS4BQ8N8V4 417 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 BANK1Q8NDB2 785 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 NSUN4Q96CB9 384 aaKnown RBP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 TRIM6Q9C030 488 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 AGPAT5Q9NUQ2 364 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 NKIRAS1Q9NYS0 192 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 NXF1Q9UBU9 619 aaKnown RBP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 SEPT9Q9UHD8 586 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 TRPC6Q9Y210 931 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 COL15A1P39059 1388 aa9.95□□□□□ -0.82
SMARCA1-202ENST00000371122 ONECUT3O60422 494 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 RNF40O75150 1001 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 ZBTB7AO95365 584 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 TFRCP02786 760 aaKnown RBP9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 ADCY8P40145 1251 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 KLK7P49862 253 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 MAN2A1Q16706 1144 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 MTERF2Q49AM1 385 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 HP1BP3Q5SSJ5 553 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 FAM83BQ5T0W9 1011 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 NFRKBQ6P4R8 1299 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 SFR1Q86XK3 245 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 DGKHQ86XP1 1220 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 DNAAF5Q86Y56 855 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 RIN2Q8WYP3 895 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 UBE2TQ9NPD8 197 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 NARFQ9UHQ1 456 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 NFU1Q9UMS0 254 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 TOGARAM1Q9Y4F4 1720 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 DCAF8L1A6NGE4 600 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 LRRC53A6NM62 1247 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 TRIM49P0CI25 452 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 TRIM49CP0CI26 452 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 GPATCH4Q5T3I0 446 aaKnown RBP9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 KRT27Q7Z3Y8 459 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 ZBTB33Q86T24 672 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 MLXIPLQ9NP71 852 aa9.94□□□□□ -0.82
SMARCA1-202ENST00000371122 RWDD2AQ9UIY3 292 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms