RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 DNAJC19Q96DA6 116 aa19.32■□□□□ 0.68
CHUK-201ENST00000370397 DYNLL2Q96FJ2 89 aa19.32■□□□□ 0.68
CHUK-201ENST00000370397 CRNKL1Q9BZJ0 848 aaKnown RBP19.32■□□□□ 0.68
CHUK-201ENST00000370397 TAF1DQ9H5J8 278 aaPredicted RBP19.32■□□□□ 0.68
CHUK-201ENST00000370397 PCDHA2Q9Y5H9 948 aa19.32■□□□□ 0.68
CHUK-201ENST00000370397 FXR2P51116 673 aaKnown RBP eCLIP19.32■□□□□ 0.68
CHUK-201ENST00000370397 SF3B3Q15393 1217 aaKnown RBP19.32■□□□□ 0.68
CHUK-201ENST00000370397 TMEM119Q4V9L6 283 aa19.32■□□□□ 0.68
CHUK-201ENST00000370397 SPZ1Q9BXG8 430 aa19.32■□□□□ 0.68
CHUK-201ENST00000370397 CPVLQ9H3G5 476 aa19.32■□□□□ 0.68
CHUK-201ENST00000370397 MCM8Q9UJA3 840 aa19.32■□□□□ 0.68
CHUK-201ENST00000370397 LETM2Q2VYF4 491 aa19.32■□□□□ 0.68
CHUK-201ENST00000370397 C3orf20Q8ND61 904 aa19.32■□□□□ 0.68
CHUK-201ENST00000370397 GANQ9H2C0 597 aa19.32■□□□□ 0.68
CHUK-201ENST00000370397 AIPL1Q9NZN9 384 aa19.32■□□□□ 0.68
CHUK-201ENST00000370397 ZNF831Q5JPB2 1677 aa19.31■□□□□ 0.68
CHUK-201ENST00000370397 FLT3P36888 993 aa19.31■□□□□ 0.68
CHUK-201ENST00000370397 DRP2Q13474 957 aa19.31■□□□□ 0.68
CHUK-201ENST00000370397 RPAINQ86UA6 219 aa19.31■□□□□ 0.68
CHUK-201ENST00000370397 OLIG1Q8TAK6 271 aa19.31■□□□□ 0.68
CHUK-201ENST00000370397 ERCC3P19447 782 aa19.31■□□□□ 0.68
CHUK-201ENST00000370397 CRKLP46109 303 aaKnown RBP19.31■□□□□ 0.68
CHUK-201ENST00000370397 PREPLQ4J6C6 727 aaPredicted RBP19.31■□□□□ 0.68
CHUK-201ENST00000370397 KLC4Q9NSK0 619 aa19.31■□□□□ 0.68
CHUK-201ENST00000370397 STK17AQ9UEE5 414 aa19.31■□□□□ 0.68
CHUK-201ENST00000370397 AMPD3Q01432 767 aa19.31■□□□□ 0.68
CHUK-201ENST00000370397 NEK8Q86SG6 692 aa19.31■□□□□ 0.68
CHUK-201ENST00000370397 TMEM47Q9BQJ4 181 aa19.31■□□□□ 0.68
CHUK-201ENST00000370397 SLC37A4O43826 429 aa19.3■□□□□ 0.68
CHUK-201ENST00000370397 MAP2K2P36507 400 aa19.3■□□□□ 0.68
CHUK-201ENST00000370397 KRT25Q7Z3Z0 450 aa19.3■□□□□ 0.68
CHUK-201ENST00000370397 OR2W6PQ8NHA6 318 aa19.3■□□□□ 0.68
CHUK-201ENST00000370397 LARP4BQ92615 738 aaKnown RBP19.3■□□□□ 0.68
CHUK-201ENST00000370397 JPH2Q9BR39 696 aaPredicted RBP19.3■□□□□ 0.68
CHUK-201ENST00000370397 SLC40A1Q9NP59 571 aa19.3■□□□□ 0.68
CHUK-201ENST00000370397 CCDC87Q9NVE4 849 aa19.3■□□□□ 0.68
CHUK-201ENST00000370397 COL14A1Q05707 1796 aaKnown RBP19.3■□□□□ 0.68
CHUK-201ENST00000370397 DCDC2CA8MYV0 355 aa19.3■□□□□ 0.68
CHUK-201ENST00000370397 USP8P40818 1118 aa19.3■□□□□ 0.68
CHUK-201ENST00000370397 ORC2Q13416 577 aaPredicted RBP19.3■□□□□ 0.68
CHUK-201ENST00000370397 PROM2Q8N271 834 aa19.3■□□□□ 0.68
CHUK-201ENST00000370397 RAD54LQ92698 747 aa19.3■□□□□ 0.68
CHUK-201ENST00000370397 NONOQ15233 471 aaKnown RBP eCLIP19.3■□□□□ 0.68
CHUK-201ENST00000370397 TRIM59Q8IWR1 403 aa19.3■□□□□ 0.68
CHUK-201ENST00000370397 NLRC4Q9NPP4 1024 aa19.3■□□□□ 0.68
CHUK-201ENST00000370397 NT5C2P49902 561 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 CCDC40Q4G0X9 1142 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 SV2BQ7L1I2 683 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 ACTRT1Q8TDG2 376 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 TBCKQ8TEA7 893 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 CELF1Q92879 486 aaKnown RBP19.29■□□□□ 0.68
CHUK-201ENST00000370397 TXLNGYQ9BZA5 131 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 NIP7Q9Y221 180 aaKnown RBP eCLIP19.29■□□□□ 0.68
CHUK-201ENST00000370397 NOVP48745 357 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 GNAQP50148 359 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 IFT88Q13099 833 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 SLC4A8Q2Y0W8 1093 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 CEP85LQ5SZL2 805 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 GOLGA8HP0CJ92 632 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 ITPK1Q13572 414 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 LRRC41Q15345 812 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 SLC9C1Q4G0N8 1177 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 CAVIN4Q5BKX8 364 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 CHADLQ6NUI6 762 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 DYMQ7RTS9 669 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 TBC1D5Q92609 795 aa19.29■□□□□ 0.68
CHUK-201ENST00000370397 CCDC47Q96A33 483 aaKnown RBP19.29■□□□□ 0.68
CHUK-201ENST00000370397 UBAP1LF5GYI3 381 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 POU5F1Q01860 360 aaKnown RBP19.28■□□□□ 0.68
CHUK-201ENST00000370397 KCTD19Q17RG1 926 aaPredicted RBP19.28■□□□□ 0.68
CHUK-201ENST00000370397 LACTB2Q53H82 288 aaPredicted RBP19.28■□□□□ 0.68
CHUK-201ENST00000370397 SFMBT2Q5VUG0 894 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 IRF2BP2Q7Z5L9 587 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 GPATCH11Q8N954 259 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 DDX12PQ92771 950 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 LEMD3Q9Y2U8 911 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 KIAA0754O94854 1291 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 ERFEQ4G0M1 354 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 ANKRD20A8PQ5CZ79 823 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 RIC8AQ9NPQ8 531 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 MCM9Q9NXL9 1143 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 STXBP5LQ9Y2K9 1186 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 COL4A3BPQ9Y5P4 624 aa19.28■□□□□ 0.68
CHUK-201ENST00000370397 MICALCLQ6ZW33 695 aa19.27■□□□□ 0.68
CHUK-201ENST00000370397 DDX42Q86XP3 938 aaKnown RBP eCLIP19.27■□□□□ 0.68
CHUK-201ENST00000370397 SLC44A5Q8NCS7 719 aa19.27■□□□□ 0.68
CHUK-201ENST00000370397 NUCKS1Q9H1E3 243 aaKnown RBP19.27■□□□□ 0.68
CHUK-201ENST00000370397 E7EVH7 732 aa19.27■□□□□ 0.68
CHUK-201ENST00000370397 CHUKO15111 745 aa19.27■□□□□ 0.68
CHUK-201ENST00000370397 RASA1P20936 1047 aa19.27■□□□□ 0.68
CHUK-201ENST00000370397 USP11P51784 963 aa19.27■□□□□ 0.68
CHUK-201ENST00000370397 FUKQ8N0W3 1084 aa19.27■□□□□ 0.68
CHUK-201ENST00000370397 KCTD10Q9H3F6 313 aa19.27■□□□□ 0.68
CHUK-201ENST00000370397 TMEM260Q9NX78 707 aa19.27■□□□□ 0.68
CHUK-201ENST00000370397 EVA1CP58658 441 aa19.27■□□□□ 0.67
CHUK-201ENST00000370397 SLFN11Q7Z7L1 901 aa19.27■□□□□ 0.67
CHUK-201ENST00000370397 EPB41L4BQ9H329 900 aa19.27■□□□□ 0.67
CHUK-201ENST00000370397 GMNCA6NCL1 334 aa19.26■□□□□ 0.67
CHUK-201ENST00000370397 SMCO2A6NFE2 343 aa19.26■□□□□ 0.67
CHUK-201ENST00000370397 PSMD2Q13200 908 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms