RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 FRMPD4Q14CM0 1322 aa9.44□□□□□ -0.9
RNU4-59P-201ENST00000364447 KAT6AQ92794 2004 aa9.44□□□□□ -0.9
RNU4-59P-201ENST00000364447 LCHNA4D1U4 455 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 CCDC69A6NI79 296 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 RSPH10B2B2RC85 870 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 LGR5O75473 907 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 GJB5O95377 273 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 RSPH10BP0C881 870 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 SMIM10L2AP0DMW4 78 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 SMIM10L2BP0DMW5 78 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 POU3F3P20264 500 aaPredicted RBP9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 MCM5P33992 734 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 GNAQP50148 359 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 MRPS9P82933 396 aaKnown RBP9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 SP4Q02446 784 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 TFF2Q03403 129 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 GRB10Q13322 594 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 KRT40Q6A162 431 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 FAM117BQ6P1L5 589 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 METTL7BQ6UX53 244 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 CYFIP1Q7L576 1253 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 GDPD5Q8WTR4 605 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 WNT8BQ93098 351 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 RAD9AQ99638 391 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 LZTS2Q9BRK4 669 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 USP26Q9BXU7 913 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 LY9Q9HBG7 655 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 RTEL1Q9NZ71 1219 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 ZNF215Q9UL58 517 aaPredicted RBP9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 MTUS1Q9ULD2 1270 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 COG5Q9UP83 839 aa9.43□□□□□ -0.9
RNU4-59P-201ENST00000364447 TRANK1O15050 2925 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 SPATA31C2B4DYI2 1134 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 AMHP03971 560 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 CALM1P0DP23 149 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 CALM2P0DP24 149 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 CALM3P0DP25 149 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 GNAT1P11488 350 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 SMARCA1P28370 1054 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 ICAM3P32942 547 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 KCNQ1P51787 676 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 HIC1Q14526 733 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 MBTPS1Q14703 1052 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 TCTN1Q2MV58 587 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 PCNX4Q63HM2 1172 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 XRRA1Q6P2D8 792 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 TRAF7Q6Q0C0 670 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 USP17L6PQ6QN14 398 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 SPRED2Q7Z698 418 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 NLRX1Q86UT6 975 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 TRIM50Q86XT4 487 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 MYOCDQ8IZQ8 938 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 TMTC2Q8N394 836 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 GIMAP8Q8ND71 665 aaPredicted RBP9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 TGS1Q96RS0 853 aaKnown RBP9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 MTA3Q9BTC8 594 aa9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 SPTBN5Q9NRC6 3674 aaKnown RBP9.42□□□□□ -0.9
RNU4-59P-201ENST00000364447 NCOR1O75376 2440 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 NLRC5Q86WI3 1866 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 LINC01553A4QN01 128 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 PIK3CDO00329 1044 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 SH2B2O14492 632 aaPredicted RBP9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 TREHO43280 583 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 CAND2O75155 1236 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 PLEKHA8P1O95397 391 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 CTSHP09668 335 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 RXRAP19793 462 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 HOXC8P31273 242 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 ARHGAP4P98171 946 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 SEMA3FQ13275 785 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 UTP14CQ5TAP6 766 aaKnown RBP9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 DBF4BQ8NFT6 615 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 SEPT8Q92599 483 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 HLA-CQ95604 372 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 CDHR1Q96JP9 859 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 TMEM87BQ96K49 555 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 GPR20Q99678 358 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 RNPEPQ9H4A4 650 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 BCAS3Q9H6U6 928 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 SETD4Q9NVD3 440 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 INSL6Q9Y581 213 aa9.41□□□□□ -0.9
RNU4-59P-201ENST00000364447 SPDYE3A6NKU9 549 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 MEIS2O14770 477 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 SLC27A2O14975 620 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 LPXNO60711 386 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 BMP1P13497 986 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 ERVK-21P61565 698 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 PLEKHG4Q58EX7 1191 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 CMTR1Q8N1G2 835 aaKnown RBP9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 CCDC82Q8N4S0 544 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 SRBD1Q8N5C6 995 aaKnown RBP9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 FBXO22Q8NEZ5 403 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 LMBR1Q8WVP7 490 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 GPRASP2Q96D09 838 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 NECAB3Q96P71 396 aaPredicted RBP9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 YME1L1Q96TA2 773 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 SENP7Q9BQF6 1050 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 ESYT1Q9BSJ8 1104 aa9.4□□□□□ -0.9
RNU4-59P-201ENST00000364447 LSG1Q9H089 658 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms