RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CHD1O14646 1710 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 ERVV-2B6SEH9 535 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 SART1O43290 800 aaKnown RBP17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 STRN3Q13033 797 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 TBX2Q13207 712 aaPredicted RBP17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 DDB1Q16531 1140 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 ADSSL1Q8N142 457 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 TBCKQ8TEA7 893 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 ENO4A6NNW6 628 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 POC1B-GALNT4F8VUJ3 575 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 KIF3CO14782 793 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 DAPK3O43293 454 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 GFPT2O94808 682 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 DYNLL1P63167 89 aaKnown RBP17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 LRRC23Q53EV4 343 aaPredicted RBP17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 ATG9AQ7Z3C6 839 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 RPUSD2Q8IZ73 545 aaKnown RBP17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 TGFBRAP1Q8WUH2 860 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 SETDB2Q96T68 719 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 SPZ1Q9BXG8 430 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 ANKARQ7Z5J8 1434 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 PP2D1A8MPX8 630 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 PPP1R3GB7ZBB8 358 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 DIAPH2O60879 1101 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 IFNB1P01574 187 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 PDHA1P08559 390 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 PDE6BP35913 854 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 CACNB1Q02641 598 aaPredicted RBP17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 RASGRF1Q13972 1273 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 PPP1R21Q6ZMI0 780 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 STAG2Q8N3U4 1231 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 OR2W6PQ8NHA6 318 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 RILPQ96NA2 401 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 IMPG2Q9BZV3 1241 aa17.36■□□□□ 0.37
CLSTN1-201ENST00000361311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.36■□□□□ 0.375e-7■■□□□ 12.1
CLSTN1-201ENST00000361311 HSPA1LP34931 641 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 RCAN1P53805 252 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 LIN9Q5TKA1 542 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 EYA3Q99504 573 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 AZI2Q9H6S1 392 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 ATP8A2Q9NTI2 1148 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 SLAIN2Q9P270 581 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 ACSL3O95573 720 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 CFAP157Q5JU67 520 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 KDM7AQ6ZMT4 941 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 IGDCC4Q8TDY8 1250 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 PTPRMP28827 1452 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 ALKQ9UM73 1620 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 PAPD7Q5XG87 772 aaKnown RBP17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 SEPT14Q6ZU15 432 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 PDCD7Q8N8D1 485 aaKnown RBP17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 FBXO41Q8TF61 875 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 ECEL1O95672 775 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 SATB1Q01826 763 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 PSMD2Q13200 908 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 ALX1Q15699 326 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 TMC4Q7Z404 712 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 SDCCAG8Q86SQ7 713 aaPredicted RBP17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 FOXP4Q8IVH2 680 aaPredicted RBP17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 PITPNM3Q9BZ71 974 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 AMACRQ9UHK6 382 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 AGTPBP1Q9UPW5 1226 aa17.35■□□□□ 0.37
CLSTN1-201ENST00000361311 ARHGAP42A6NI28 874 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 KCNB1Q14721 858 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 CYP4F22Q6NT55 531 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 ILDR1Q86SU0 546 aaPredicted RBP17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 ECT2Q9H8V3 914 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 DDX25Q9UHL0 483 aaKnown RBP17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 USH1CQ9Y6N9 552 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 CD44P16070 742 aaKnown RBP17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 ANKRD40Q6AI12 368 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 UNC13DQ70J99 1090 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 APBB1IPQ7Z5R6 666 aaPredicted RBP17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 TTLL11Q8NHH1 800 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 ACSBG1Q96GR2 724 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 TSNARE1Q96NA8 513 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 ETNK1Q9HBU6 452 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 SENP2Q9HC62 589 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 MLXIPLQ9NP71 852 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 PFDN1O60925 122 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 MAEAQ7L5Y9 396 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 MTA3Q9BTC8 594 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 EHD2Q9NZN4 543 aa17.34■□□□□ 0.37
CLSTN1-201ENST00000361311 ARHGEF35A5YM69 484 aa17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 PMS2P54278 862 aa17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 SEPT6Q14141 434 aa17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 PLCB4Q15147 1175 aa17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 LRIG3Q6UXM1 1119 aa17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 DDX23Q9BUQ8 820 aaKnown RBP17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 EMILIN3Q9NT22 766 aa17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 ZBTB21Q9ULJ3 1066 aa17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 RPS6KA5O75582 802 aa17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 MYCNP04198 464 aaPredicted RBP17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 AARSP49588 968 aaKnown RBP eCLIP17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 CRYMQ14894 314 aa17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 FAM47EQ6ZV65 393 aa17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 ENAHQ8N8S7 591 aaPredicted RBP17.33■□□□□ 0.37
CLSTN1-201ENST00000361311 LACRTQ9GZZ8 138 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms