RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 MYO3BQ8WXR4 1341 aa19.52■□□□□ 0.72
GYPC-202ENST00000356887 AGPSO00116 658 aa19.52■□□□□ 0.72
GYPC-202ENST00000356887 TRAF5O00463 557 aa19.52■□□□□ 0.72
GYPC-202ENST00000356887 GYS1P13807 737 aa19.52■□□□□ 0.72
GYPC-202ENST00000356887 GPIHBP1Q8IV16 184 aa19.52■□□□□ 0.72
GYPC-202ENST00000356887 RNF10Q8N5U6 811 aaKnown RBP19.52■□□□□ 0.72
GYPC-202ENST00000356887 AFAP1L1Q8TED9 768 aa19.52■□□□□ 0.72
GYPC-202ENST00000356887 HDAC7Q8WUI4 952 aa19.52■□□□□ 0.72
GYPC-202ENST00000356887 TRERF1Q96PN7 1200 aa19.52■□□□□ 0.72
GYPC-202ENST00000356887 CRACR2AQ9BSW2 395 aa19.52■□□□□ 0.72
GYPC-202ENST00000356887 TANGO6Q9C0B7 1094 aa19.52■□□□□ 0.72
GYPC-202ENST00000356887 NUCKS1Q9H1E3 243 aaKnown RBP19.52■□□□□ 0.72
GYPC-202ENST00000356887 USP17L10C9JJH3 530 aa19.52■□□□□ 0.71
GYPC-202ENST00000356887 ZBTB5O15062 677 aa19.52■□□□□ 0.71
GYPC-202ENST00000356887 SHMT1P34896 483 aa19.52■□□□□ 0.71
GYPC-202ENST00000356887 GGCXP38435 758 aa19.52■□□□□ 0.71
GYPC-202ENST00000356887 RASSF7Q02833 373 aa19.52■□□□□ 0.71
GYPC-202ENST00000356887 EN1Q05925 392 aaPredicted RBP19.52■□□□□ 0.71
GYPC-202ENST00000356887 CCDC40Q4G0X9 1142 aa19.52■□□□□ 0.71
GYPC-202ENST00000356887 GPATCH4Q5T3I0 446 aaKnown RBP19.52■□□□□ 0.71
GYPC-202ENST00000356887 CRAMP1Q96RY5 1269 aa19.52■□□□□ 0.71
GYPC-202ENST00000356887 TLR10Q9BXR5 811 aa19.52■□□□□ 0.71
GYPC-202ENST00000356887 NT5C3AQ9H0P0 336 aa19.52■□□□□ 0.71
GYPC-202ENST00000356887 PSTPIP2Q9H939 334 aa19.52■□□□□ 0.71
GYPC-202ENST00000356887 BMP2KQ9NSY1 1161 aaPredicted RBP19.52■□□□□ 0.71
GYPC-202ENST00000356887 DMGDHQ9UI17 866 aaKnown RBP19.52■□□□□ 0.71
GYPC-202ENST00000356887 SERPINB13Q9UIV8 391 aa19.52■□□□□ 0.71
GYPC-202ENST00000356887 SUGT1Q9Y2Z0 365 aa19.52■□□□□ 0.71
GYPC-202ENST00000356887 MYH7BA7E2Y1 1941 aa19.51■□□□□ 0.71
GYPC-202ENST00000356887 KDM3AQ9Y4C1 1321 aa19.51■□□□□ 0.71
GYPC-202ENST00000356887 MARCH6O60337 910 aa19.51■□□□□ 0.71
GYPC-202ENST00000356887 TLR2O60603 784 aa19.51■□□□□ 0.71
GYPC-202ENST00000356887 SLC16A2P36021 539 aa19.51■□□□□ 0.71
GYPC-202ENST00000356887 SLC1A4P43007 532 aa19.51■□□□□ 0.71
GYPC-202ENST00000356887 ANKRD13CQ8N6S4 541 aa19.51■□□□□ 0.71
GYPC-202ENST00000356887 GOLGA6L1Q8N7Z2 621 aa19.51■□□□□ 0.71
GYPC-202ENST00000356887 NOX5Q96PH1 765 aa19.51■□□□□ 0.71
GYPC-202ENST00000356887 NAP1L4Q99733 375 aaKnown RBP19.51■□□□□ 0.71
GYPC-202ENST00000356887 FGFBP2Q9BYJ0 223 aa19.51■□□□□ 0.71
GYPC-202ENST00000356887 GEMIN8Q9NWZ8 242 aaKnown RBP19.51■□□□□ 0.71
GYPC-202ENST00000356887 NCK2O43639 380 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 GNA14O95837 355 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 SERPING1P05155 500 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 MARSP56192 900 aaKnown RBP19.5■□□□□ 0.71
GYPC-202ENST00000356887 SLC9C1Q4G0N8 1177 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 FAM83BQ5T0W9 1011 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 KLHDC7AQ5VTJ3 777 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 SFMBT2Q5VUG0 894 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 LRRC31Q6UY01 552 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 RIN2Q8WYP3 895 aaPredicted RBP19.5■□□□□ 0.71
GYPC-202ENST00000356887 NLRC4Q9NPP4 1024 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 LTBP1Q14766 1721 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 E9PMD0 336 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 SLC26A4O43511 780 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 SSBP05455 408 aaKnown RBP eCLIP19.5■□□□□ 0.71
GYPC-202ENST00000356887 PLA2G4BP0C869 781 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 CXCR5P32302 372 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 TRIM59Q8IWR1 403 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 CCDC65Q8IXS2 484 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 LSM14BQ9BX40 385 aaKnown RBP19.5■□□□□ 0.71
GYPC-202ENST00000356887 KIAA1024Q9UPX6 916 aa19.5■□□□□ 0.71
GYPC-202ENST00000356887 CERS5Q8N5B7 392 aa19.49■□□□□ 0.71
GYPC-202ENST00000356887 CAMKK2Q96RR4 588 aa19.49■□□□□ 0.71
GYPC-202ENST00000356887 COA1Q9GZY4 146 aa19.49■□□□□ 0.71
GYPC-202ENST00000356887 USP40Q9NVE5 1235 aa19.49■□□□□ 0.71
GYPC-202ENST00000356887 SMARCAL1Q9NZC9 954 aa19.49■□□□□ 0.71
GYPC-202ENST00000356887 TBC1D7Q9P0N9 293 aa19.49■□□□□ 0.71
GYPC-202ENST00000356887 ARFGEF1Q9Y6D6 1849 aa19.49■□□□□ 0.71
GYPC-202ENST00000356887 F8W031 263 aaPredicted RBP19.48■□□□□ 0.71
GYPC-202ENST00000356887 PAFAH1B1P43034 410 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 TDRD12Q587J7 1177 aaKnown RBP19.48■□□□□ 0.71
GYPC-202ENST00000356887 CCDC181Q5TID7 509 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 KCTD1Q719H9 257 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 ZC3H3Q8IXZ2 948 aaKnown RBP19.48■□□□□ 0.71
GYPC-202ENST00000356887 PSMB7Q99436 277 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 HINFPQ9BQA5 517 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 KCTD10Q9H3F6 313 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 EHD2Q9NZN4 543 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 TSKSQ9UJT2 592 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 NPHP3-ACAD11A0A0J9YXS1 232 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 GOLGA6BA6NDN3 693 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 BUB1O43683 1085 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 HAUS3Q68CZ6 603 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 FOXR1Q6PIV2 292 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 SND1Q7KZF4 910 aaKnown RBP eCLIP19.48■□□□□ 0.71
GYPC-202ENST00000356887 SP8Q8IXZ3 490 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 DHX37Q8IY37 1157 aaKnown RBP19.48■□□□□ 0.71
GYPC-202ENST00000356887 SCFD1Q8WVM8 642 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 KCNMB3Q9NPA1 279 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 LCMT1Q9UIC8 334 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 ATP6V0A2Q9Y487 856 aa19.48■□□□□ 0.71
GYPC-202ENST00000356887 KLRG2A4D1S0 409 aaPredicted RBP19.47■□□□□ 0.71
GYPC-202ENST00000356887 RIMBP2O15034 1052 aa19.47■□□□□ 0.71
GYPC-202ENST00000356887 CYP11B2P19099 503 aa19.47■□□□□ 0.71
GYPC-202ENST00000356887 MATR3P43243 847 aaKnown RBP eCLIP19.47■□□□□ 0.713e-6■■■■■ 30.1
GYPC-202ENST00000356887 USP11P51784 963 aa19.47■□□□□ 0.71
GYPC-202ENST00000356887 POLR2FP61218 127 aaKnown RBP19.47■□□□□ 0.71
GYPC-202ENST00000356887 GPBP1Q86WP2 473 aa19.47■□□□□ 0.71
GYPC-202ENST00000356887 COL23A1Q86Y22 540 aaPredicted RBP19.47■□□□□ 0.71
GYPC-202ENST00000356887 NELFCDQ8IXH7 590 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms