RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ABCA6Q8N139 1617 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 ADGRL3Q9HAR2 1447 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 BPIFB4P59827 614 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 FOXO4P98177 505 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 APOL6Q9BWW8 343 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 PNMA2Q9UL42 364 aa17.41■□□□□ 0.38
PTPN11-201ENST00000351677 H7C0C1 242 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 ATP5OP48047 213 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 PFKFB3Q16875 520 aaPredicted RBP17.4■□□□□ 0.38
PTPN11-201ENST00000351677 HACE1Q8IYU2 909 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 SLC7A3Q8WY07 619 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 SH3GLB2Q9NR46 395 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 ATP8B1O43520 1251 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 MRPS25P82663 173 aaKnown RBP17.4■□□□□ 0.38
PTPN11-201ENST00000351677 FBXO38Q6PIJ6 1188 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 STK36Q9NRP7 1315 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 SGK1O00141 431 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 TMEM47Q9BQJ4 181 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 FAM114A2Q9NRY5 505 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 POTEMA6NI47 508 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 SCARF1Q14162 830 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 SULF1Q8IWU6 871 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 BHMT2Q9H2M3 363 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 CLEC4GQ6UXB4 293 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 DCPSQ96C86 337 aaKnown RBP17.4■□□□□ 0.38
PTPN11-201ENST00000351677 MAD1L1Q9Y6D9 718 aa17.4■□□□□ 0.38
PTPN11-201ENST00000351677 TXNDC9O14530 226 aa17.39■□□□□ 0.38
PTPN11-201ENST00000351677 NME8Q8N427 588 aa17.39■□□□□ 0.38
PTPN11-201ENST00000351677 CELF1Q92879 486 aaKnown RBP17.39■□□□□ 0.38
PTPN11-201ENST00000351677 TMEM206Q9H813 350 aa17.39■□□□□ 0.38
PTPN11-201ENST00000351677 RASSF2P50749 326 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 CCDC144BQ3MJ40 725 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 RNF10Q8N5U6 811 aaKnown RBP17.39■□□□□ 0.37
PTPN11-201ENST00000351677 UBN2Q6ZU65 1347 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 LRRC63Q05C16 580 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 SEPT2Q15019 361 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 SGO2Q562F6 1265 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 RFX6Q8HWS3 928 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 BBOF1Q8ND07 529 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 HAUS1Q96CS2 278 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 AP1M1Q9BXS5 423 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 INO80B-WBP1J3KQ70 363 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 INO80BQ9C086 356 aaPredicted RBP17.39■□□□□ 0.37
PTPN11-201ENST00000351677 GOLGA8IPA6NC78 632 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 GOLGA8JA6NMD2 632 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 PPP2R5AQ15172 486 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 VCX3BQ9H321 246 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 ADAMTS1Q9UHI8 967 aa17.39■□□□□ 0.37
PTPN11-201ENST00000351677 CPDO75976 1380 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 CCDC151A5D8V7 595 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 YWHAGP61981 247 aaKnown RBP eCLIP17.38■□□□□ 0.37
PTPN11-201ENST00000351677 ABCB6Q9NP58 842 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 INTS9Q9NV88 658 aaKnown RBP17.38■□□□□ 0.37
PTPN11-201ENST00000351677 GOLGA8SH3BPF8 625 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 SLC17A8Q8NDX2 589 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 KIF28PB7ZC32 967 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 MTERF2Q49AM1 385 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 MIS18BP1Q6P0N0 1132 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 ZNF579Q8NAF0 562 aaKnown RBP17.38■□□□□ 0.37
PTPN11-201ENST00000351677 CROCC2H7BZ55 1655 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 PIGOQ8TEQ8 1089 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 PPP4R1Q8TF05 950 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 COA1Q9GZY4 146 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 ABL1P00519 1130 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 SAT1P21673 171 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 PRCPP42785 496 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 STOX1Q6ZVD7 989 aa17.38■□□□□ 0.37
PTPN11-201ENST00000351677 DCP1AQ9NPI6 582 aaPredicted RBP17.38■□□□□ 0.37
PTPN11-201ENST00000351677 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.38■□□□□ 0.37
PTPN11-201ENST00000351677 CYP19A1P11511 503 aaPredicted RBP17.37■□□□□ 0.37
PTPN11-201ENST00000351677 AKT3Q9Y243 479 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 EIF2AK2P19525 551 aaKnown RBP17.37■□□□□ 0.37
PTPN11-201ENST00000351677 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 EEPD1Q7L9B9 569 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 ISCA1Q9BUE6 129 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 AFG3L2Q9Y4W6 797 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 GSG1L2A8MUP6 293 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 MXI1P50539 228 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 DHX9Q08211 1270 aaKnown RBP17.37■□□□□ 0.37
PTPN11-201ENST00000351677 ZBTB33Q86T24 672 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 ARHGAP42A6NI28 874 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 CCND2P30279 289 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 IFT88Q13099 833 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 TFDP1Q14186 410 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 KCTD2Q14681 263 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 CYP4F22Q6NT55 531 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 RUNDC3BQ96NL0 473 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 SLC5A4Q9NY91 659 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 CDHR2Q9BYE9 1310 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 GH2P01242 217 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 CLTAP09496 248 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 TFAMQ00059 246 aaKnown RBP17.37■□□□□ 0.37
PTPN11-201ENST00000351677 ABHD10Q9NUJ1 306 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 TMEM260Q9NX78 707 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 RIPOR2Q9Y4F9 1068 aa17.37■□□□□ 0.37
PTPN11-201ENST00000351677 WDR19Q8NEZ3 1342 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 FAM196BA6NMK8 535 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 NBPF26B4DH59 902 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 SRGAP2O75044 1071 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 RPS6KA4O75676 772 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms