RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 ATP6V0A2Q9Y487 856 aa19.55■□□□□ 0.72
APP-202ENST00000348990 COL4A3BPQ9Y5P4 624 aa19.55■□□□□ 0.72
APP-202ENST00000348990 DISP2A7MBM2 1401 aa19.54■□□□□ 0.72
APP-202ENST00000348990 SSU72P8A0A1W2PR75 194 aa19.54■□□□□ 0.72
APP-202ENST00000348990 PJA2O43164 708 aa19.54■□□□□ 0.72
APP-202ENST00000348990 SART1O43290 800 aaKnown RBP19.54■□□□□ 0.72
APP-202ENST00000348990 TNFRSF8P28908 595 aa19.54■□□□□ 0.72
APP-202ENST00000348990 GNA11P29992 359 aa19.54■□□□□ 0.72
APP-202ENST00000348990 PPP4R3AQ6IN85 833 aa19.54■□□□□ 0.72
APP-202ENST00000348990 USP17L2Q6R6M4 530 aa19.54■□□□□ 0.72
APP-202ENST00000348990 FLT1P17948 1338 aa19.54■□□□□ 0.72
APP-202ENST00000348990 IL6STP40189 918 aaPredicted RBP19.54■□□□□ 0.72
APP-202ENST00000348990 TNNI2P48788 182 aa19.54■□□□□ 0.72
APP-202ENST00000348990 CCDC24Q8N4L8 307 aa19.54■□□□□ 0.72
APP-202ENST00000348990 UHMK1Q8TAS1 419 aaKnown RBP19.54■□□□□ 0.72
APP-202ENST00000348990 ZNF384Q8TF68 577 aa19.54■□□□□ 0.72
APP-202ENST00000348990 GJA10Q969M2 543 aa19.54■□□□□ 0.72
APP-202ENST00000348990 NSUN4Q96CB9 384 aaKnown RBP19.54■□□□□ 0.72
APP-202ENST00000348990 FAM84BQ96KN1 310 aaPredicted RBP19.54■□□□□ 0.72
APP-202ENST00000348990 ATP8A1Q9Y2Q0 1164 aa19.54■□□□□ 0.72
APP-202ENST00000348990 PPP1R12BO60237 982 aaPredicted RBP19.53■□□□□ 0.72
APP-202ENST00000348990 KLRK1P26718 216 aa19.53■□□□□ 0.72
APP-202ENST00000348990 GUF1Q8N442 669 aaKnown RBP19.53■□□□□ 0.72
APP-202ENST00000348990 CHD4Q14839 1912 aa19.53■□□□□ 0.72
APP-202ENST00000348990 DDX60Q8IY21 1712 aaKnown RBP19.53■□□□□ 0.72
APP-202ENST00000348990 TLR2O60603 784 aa19.53■□□□□ 0.72
APP-202ENST00000348990 PRPHP41219 470 aa19.53■□□□□ 0.72
APP-202ENST00000348990 FKBP3Q00688 224 aaKnown RBP19.53■□□□□ 0.72
APP-202ENST00000348990 KCNMA1Q12791 1236 aa19.53■□□□□ 0.72
APP-202ENST00000348990 HGSNATQ68CP4 663 aa19.53■□□□□ 0.72
APP-202ENST00000348990 HIBCHQ6NVY1 386 aaPredicted RBP19.53■□□□□ 0.72
APP-202ENST00000348990 IL17RBQ9NRM6 502 aa19.53■□□□□ 0.72
APP-202ENST00000348990 ATP8A2Q9NTI2 1148 aa19.53■□□□□ 0.72
APP-202ENST00000348990 CEP72Q9P209 647 aa19.53■□□□□ 0.72
APP-202ENST00000348990 PPP2R2AP63151 447 aa19.53■□□□□ 0.72
APP-202ENST00000348990 LRRC63Q05C16 580 aa19.53■□□□□ 0.72
APP-202ENST00000348990 PEX26Q7Z412 305 aa19.53■□□□□ 0.72
APP-202ENST00000348990 TAX1BP1Q86VP1 789 aa19.53■□□□□ 0.72
APP-202ENST00000348990 REXO1Q8N1G1 1221 aaKnown RBP19.53■□□□□ 0.72
APP-202ENST00000348990 MAD2L2Q9UI95 211 aa19.53■□□□□ 0.72
APP-202ENST00000348990 GRID2IPA4D2P6 1211 aa19.52■□□□□ 0.72
APP-202ENST00000348990 DNM1LO00429 736 aa19.52■□□□□ 0.72
APP-202ENST00000348990 OPLAHO14841 1288 aa19.52■□□□□ 0.72
APP-202ENST00000348990 SLC18A3Q16572 532 aa19.52■□□□□ 0.72
APP-202ENST00000348990 NUP188Q5SRE5 1749 aa19.52■□□□□ 0.72
APP-202ENST00000348990 MEI1Q5TIA1 1274 aa19.52■□□□□ 0.72
APP-202ENST00000348990 YTHDF3Q7Z739 585 aaKnown RBP19.52■□□□□ 0.72
APP-202ENST00000348990 TCP11Q8WWU5 503 aa19.52■□□□□ 0.72
APP-202ENST00000348990 RAB34Q9BZG1 259 aa19.52■□□□□ 0.72
APP-202ENST00000348990 ACTR5Q9H9F9 607 aaPredicted RBP19.52■□□□□ 0.72
APP-202ENST00000348990 CAMTA1Q9Y6Y1 1673 aa19.52■□□□□ 0.72
APP-202ENST00000348990 CTNND1O60716 968 aaKnown RBP19.52■□□□□ 0.72
APP-202ENST00000348990 CLTAP09496 248 aa19.52■□□□□ 0.72
APP-202ENST00000348990 ZNF844Q08AG5 666 aa19.52■□□□□ 0.72
APP-202ENST00000348990 DAAM2Q86T65 1068 aa19.52■□□□□ 0.72
APP-202ENST00000348990 RAPGEF5Q92565 580 aa19.52■□□□□ 0.72
APP-202ENST00000348990 ANKS1AQ92625 1134 aa19.52■□□□□ 0.72
APP-202ENST00000348990 CELF4Q9BZC1 486 aaKnown RBP19.52■□□□□ 0.72
APP-202ENST00000348990 ISCUQ9H1K1 167 aa19.52■□□□□ 0.72
APP-202ENST00000348990 LEMD3Q9Y2U8 911 aa19.52■□□□□ 0.72
APP-202ENST00000348990 BAZ2AQ9UIF9 1905 aaKnown RBP19.52■□□□□ 0.72
APP-202ENST00000348990 DCDC2CA8MYV0 355 aa19.52■□□□□ 0.71
APP-202ENST00000348990 RAD21O60216 631 aa19.52■□□□□ 0.71
APP-202ENST00000348990 LCA5LO95447 670 aa19.52■□□□□ 0.71
APP-202ENST00000348990 ACTN1P12814 892 aa19.52■□□□□ 0.71
APP-202ENST00000348990 FLT3P36888 993 aa19.52■□□□□ 0.71
APP-202ENST00000348990 HSPA9P38646 679 aaKnown RBP19.52■□□□□ 0.71
APP-202ENST00000348990 DDR1Q08345 913 aa19.52■□□□□ 0.71
APP-202ENST00000348990 GRB10Q13322 594 aa19.52■□□□□ 0.71
APP-202ENST00000348990 SPRED3Q2MJR0 410 aa19.52■□□□□ 0.71
APP-202ENST00000348990 HERC4Q5GLZ8 1057 aaPredicted RBP19.52■□□□□ 0.71
APP-202ENST00000348990 INPP4AQ96PE3 977 aaPredicted RBP19.52■□□□□ 0.71
APP-202ENST00000348990 MMTAG2Q9BU76 263 aaKnown RBP19.52■□□□□ 0.71
APP-202ENST00000348990 OSBPL7Q9BZF2 842 aa19.52■□□□□ 0.71
APP-202ENST00000348990 ADAMTS2O95450 1211 aa19.51■□□□□ 0.71
APP-202ENST00000348990 SPTY2D1Q68D10 685 aaPredicted RBP19.51■□□□□ 0.71
APP-202ENST00000348990 DGKHQ86XP1 1220 aa19.51■□□□□ 0.71
APP-202ENST00000348990 FUKQ8N0W3 1084 aa19.51■□□□□ 0.71
APP-202ENST00000348990 HVCN1Q96D96 273 aa19.51■□□□□ 0.71
APP-202ENST00000348990 ACSBG1Q96GR2 724 aa19.51■□□□□ 0.71
APP-202ENST00000348990 TMEM47Q9BQJ4 181 aa19.51■□□□□ 0.71
APP-202ENST00000348990 DONSONQ9NYP3 566 aa19.51■□□□□ 0.71
APP-202ENST00000348990 GRM4Q14833 912 aa19.51■□□□□ 0.71
APP-202ENST00000348990 FAM26FQ5R3K3 315 aa19.51■□□□□ 0.71
APP-202ENST00000348990 PIGSQ96S52 555 aa19.51■□□□□ 0.71
APP-202ENST00000348990 NUDT12Q9BQG2 462 aa19.51■□□□□ 0.71
APP-202ENST00000348990 NUCKS1Q9H1E3 243 aaKnown RBP19.51■□□□□ 0.71
APP-202ENST00000348990 PLCB1Q9NQ66 1216 aa19.51■□□□□ 0.71
APP-202ENST00000348990 SEPT11Q9NVA2 429 aaKnown RBP19.51■□□□□ 0.71
APP-202ENST00000348990 TDP2O95551 362 aa19.5■□□□□ 0.71
APP-202ENST00000348990 ITGA4P13612 1032 aa19.5■□□□□ 0.71
APP-202ENST00000348990 DCAF17Q5H9S7 520 aaPredicted RBP19.5■□□□□ 0.71
APP-202ENST00000348990 GALNT17Q6IS24 598 aa19.5■□□□□ 0.71
APP-202ENST00000348990 CD302Q8IX05 232 aa19.5■□□□□ 0.71
APP-202ENST00000348990 MREGQ8N565 214 aa19.5■□□□□ 0.71
APP-202ENST00000348990 TGFBRAP1Q8WUH2 860 aa19.5■□□□□ 0.71
APP-202ENST00000348990 BLOC1S4Q9NUP1 217 aa19.5■□□□□ 0.71
APP-202ENST00000348990 PANK4Q9NVE7 773 aa19.5■□□□□ 0.71
APP-202ENST00000348990 FER1L4A9Z1Z3 1794 aa19.5■□□□□ 0.71
APP-202ENST00000348990 PGRMC1O00264 195 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms