RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 KCTD2Q14681 263 aa19.45■□□□□ 0.7
CLDN4-201ENST00000340958 Q3C1V9 767 aa19.45■□□□□ 0.7
CLDN4-201ENST00000340958 SH3RF1Q7Z6J0 888 aa19.45■□□□□ 0.7
CLDN4-201ENST00000340958 NLRX1Q86UT6 975 aa19.45■□□□□ 0.7
CLDN4-201ENST00000340958 GPRC5AQ8NFJ5 357 aa19.45■□□□□ 0.7
CLDN4-201ENST00000340958 SLC5A5Q92911 643 aa19.45■□□□□ 0.7
CLDN4-201ENST00000340958 KCNH7Q9NS40 1196 aa19.45■□□□□ 0.7
CLDN4-201ENST00000340958 UBIAD1Q9Y5Z9 338 aa19.45■□□□□ 0.7
CLDN4-201ENST00000340958 BECN2A8MW95 431 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 BCRP11274 1271 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 CASP1P29466 404 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 MRPS9P82933 396 aaKnown RBP19.44■□□□□ 0.7
CLDN4-201ENST00000340958 GRB10Q13322 594 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 C11orf57Q6ZUT1 292 aaPredicted RBP19.44■□□□□ 0.7
CLDN4-201ENST00000340958 SV2BQ7L1I2 683 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 PARK7Q99497 189 aaKnown RBP19.44■□□□□ 0.7
CLDN4-201ENST00000340958 NUDT12Q9BQG2 462 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 CFHR5Q9BXR6 569 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 PRDM10Q9NQV6 1147 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 STK17AQ9UEE5 414 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 TCEAL9Q9UHQ7 104 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 GOLGA6L19H0YKK7 550 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 DDX39AO00148 427 aaKnown RBP19.44■□□□□ 0.7
CLDN4-201ENST00000340958 CRHR2Q13324 411 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 DPCR1Q3MIW9 517 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 NAALADL2Q58DX5 795 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 ANKRD13CQ8N6S4 541 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 DNERQ8NFT8 737 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 MMP19Q99542 508 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 MROH8Q9H579 483 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 CBX8Q9HC52 389 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 ADD3Q9UEY8 706 aaKnown RBP19.44■□□□□ 0.7
CLDN4-201ENST00000340958 MAN1B1Q9UKM7 699 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 KIAA1024Q9UPX6 916 aa19.44■□□□□ 0.7
CLDN4-201ENST00000340958 MYL1P05976 194 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 GCLCP48506 637 aaPredicted RBP19.43■□□□□ 0.7
CLDN4-201ENST00000340958 PLCB2Q00722 1185 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 CNTN2Q02246 1040 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 DPYDQ12882 1025 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 CUL4BQ13620 913 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 COL13A1Q5TAT6 717 aaPredicted RBP19.43■□□□□ 0.7
CLDN4-201ENST00000340958 OTOP1Q7RTM1 612 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 LUZP1Q86V48 1076 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 VSIG10LQ86VR7 867 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 LARP4BQ92615 738 aaKnown RBP19.43■□□□□ 0.7
CLDN4-201ENST00000340958 PNMA5Q96PV4 448 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 GSDMAQ96QA5 445 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 MPHOSPH6Q99547 160 aaKnown RBP19.43■□□□□ 0.7
CLDN4-201ENST00000340958 RIT2Q99578 217 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 VAV3Q9UKW4 847 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 A0A0G2JMZ2 1700 aa19.43■□□□□ 0.7
CLDN4-201ENST00000340958 B4DLN1 442 aa19.42■□□□□ 0.7
CLDN4-201ENST00000340958 SLC26A4O43511 780 aa19.42■□□□□ 0.7
CLDN4-201ENST00000340958 SSBP05455 408 aaKnown RBP eCLIP19.42■□□□□ 0.7
CLDN4-201ENST00000340958 SPIRE1Q08AE8 756 aa19.42■□□□□ 0.7
CLDN4-201ENST00000340958 TAF1CQ15572 869 aaPredicted RBP19.42■□□□□ 0.7
CLDN4-201ENST00000340958 UVSSAQ2YD98 709 aa19.42■□□□□ 0.7
CLDN4-201ENST00000340958 NT5DC1Q5TFE4 455 aa19.42■□□□□ 0.7
CLDN4-201ENST00000340958 TRIML1Q8N9V2 468 aa19.42■□□□□ 0.7
CLDN4-201ENST00000340958 CCDC47Q96A33 483 aaKnown RBP19.42■□□□□ 0.7
CLDN4-201ENST00000340958 IWS1Q96ST2 819 aa19.42■□□□□ 0.7
CLDN4-201ENST00000340958 LRRC27Q9C0I9 530 aa19.42■□□□□ 0.7
CLDN4-201ENST00000340958 AGO4Q9HCK5 861 aaKnown RBP19.42■□□□□ 0.7
CLDN4-201ENST00000340958 RMND1Q9NWS8 449 aa19.42■□□□□ 0.7
CLDN4-201ENST00000340958 DACH1Q9UI36 760 aa19.42■□□□□ 0.7
CLDN4-201ENST00000340958 PSMD10O75832 226 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 FCER1AP12319 257 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 SARSP49591 514 aaKnown RBP19.41■□□□□ 0.7
CLDN4-201ENST00000340958 PPP2R5CQ13362 524 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 STXBP2Q15833 593 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 GNPTABQ3T906 1256 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 RAD54LQ92698 747 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 MTRQ99707 1265 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 KBTBD4Q9NVX7 518 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 SAMM50Q9Y512 469 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 POTEB3A0JP26 581 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 STAM2O75886 525 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 CYP4A11Q02928 519 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 MCM6Q14566 821 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 TMEM119Q4V9L6 283 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 POTEBQ6S5H4 581 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 EIF2AK1Q9BQI3 630 aaKnown RBP19.41■□□□□ 0.7
CLDN4-201ENST00000340958 TBC1D22BQ9NU19 505 aa19.41■□□□□ 0.7
CLDN4-201ENST00000340958 MED24O75448 989 aa19.4■□□□□ 0.7
CLDN4-201ENST00000340958 RPN1P04843 607 aaKnown RBP19.4■□□□□ 0.7
CLDN4-201ENST00000340958 RPA1P27694 616 aa19.4■□□□□ 0.7
CLDN4-201ENST00000340958 PDE4DQ08499 809 aa19.4■□□□□ 0.7
CLDN4-201ENST00000340958 ECM1Q16610 540 aa19.4■□□□□ 0.7
CLDN4-201ENST00000340958 CATSPER3Q86XQ3 398 aa19.4■□□□□ 0.7
CLDN4-201ENST00000340958 SHCBP1Q8NEM2 672 aa19.4■□□□□ 0.7
CLDN4-201ENST00000340958 GPRASP2Q96D09 838 aa19.4■□□□□ 0.7
CLDN4-201ENST00000340958 CDHR1Q96JP9 859 aa19.4■□□□□ 0.7
CLDN4-201ENST00000340958 UNC45AQ9H3U1 944 aa19.4■□□□□ 0.7
CLDN4-201ENST00000340958 ZCCHC17Q9NP64 241 aaKnown RBP19.4■□□□□ 0.7
CLDN4-201ENST00000340958 DNM3Q9UQ16 869 aa19.4■□□□□ 0.7
CLDN4-201ENST00000340958 GPR25O00155 361 aa19.39■□□□□ 0.7
CLDN4-201ENST00000340958 EML1O00423 815 aa19.39■□□□□ 0.7
CLDN4-201ENST00000340958 MAFGO15525 162 aa19.39■□□□□ 0.7
CLDN4-201ENST00000340958 PGK2P07205 417 aa19.39■□□□□ 0.7
CLDN4-201ENST00000340958 ALDH5A1P51649 535 aaPredicted RBP19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms