RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 LRRN2O75325 713 aa18.58■□□□□ 0.56
TRAPPC11-201ENST00000334690 GFPT2O94808 682 aa18.58■□□□□ 0.56
TRAPPC11-201ENST00000334690 KRT81Q14533 505 aa18.58■□□□□ 0.56
TRAPPC11-201ENST00000334690 OXER1Q8TDS5 423 aa18.58■□□□□ 0.56
TRAPPC11-201ENST00000334690 LIG3P49916 1009 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 JPH2Q9BR39 696 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 VCX3BQ9H321 246 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 RIPOR2Q9Y4F9 1068 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 ECM2O94769 699 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 PIK3CAP42336 1068 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 CLNS1AP54105 237 aaKnown RBP18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 FAM160B1Q5W0V3 765 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 CCT6BQ92526 530 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 CLRN2A0PK11 232 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 UBXN2AP68543 259 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 C2orf54Q08AI8 447 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 SHC4Q6S5L8 630 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 TMEM179Q6ZVK1 233 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 FAM160B2Q86V87 743 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 PAGR1Q9BTK6 254 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 BHMT2Q9H2M3 363 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 GIPC1O14908 333 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 CYP2D6P10635 497 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 MAPK4P31152 587 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 SCARF1Q14162 830 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 MAP7D3Q8IWC1 876 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 PLA2G12BQ9BX93 195 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 ABCB6Q9NP58 842 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 KMT5AQ9NQR1 393 aa18.57■□□□□ 0.56
TRAPPC11-201ENST00000334690 SH3RF3Q8TEJ3 882 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 SPZ1Q9BXG8 430 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 PTPRMP28827 1452 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 CCDC188H7C350 402 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 TMOD1P28289 359 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 USP14P54578 494 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 CCDC38Q502W7 563 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 ARMC9Q7Z3E5 817 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.56■□□□□ 0.561e-7■■■■□ 19.5
TRAPPC11-201ENST00000334690 RILPQ96NA2 401 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 CPDO75976 1380 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 PRCPP42785 496 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 SCYL2Q6P3W7 929 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 ANKFY1Q9P2R3 1169 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 DLC1Q96QB1 1528 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 M0QZ92 97 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 ORC4O43929 436 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 SUN1O94901 812 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 PLTPP55058 493 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 PPP2R5DQ14738 602 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 PPP1R12CQ9BZL4 782 aa18.56■□□□□ 0.56
TRAPPC11-201ENST00000334690 HIP1RO75146 1068 aa18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 GLE1Q53GS7 698 aaKnown RBP18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 TOGARAM2Q6ZUX3 1019 aa18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 RNF10Q8N5U6 811 aaKnown RBP18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 NSMCE1Q8WV22 266 aa18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 RAB3IPQ96QF0 476 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 MRPL47Q9HD33 250 aaKnown RBP18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 ATP8A1Q9Y2Q0 1164 aa18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 ZBTB5O15062 677 aa18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 CASP1P29466 404 aa18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 CA8P35219 290 aa18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 GRM1Q13255 1194 aa18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 CEP170P1Q96L14 293 aa18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 DHX9Q08211 1270 aaKnown RBP18.55■□□□□ 0.56
TRAPPC11-201ENST00000334690 OVOS2A0A0J9YW53 1432 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 TNS3Q68CZ2 1445 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 OVOS2Q6IE36 1432 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 EIF3CLB5ME19 914 aaKnown RBP18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 ECEL1O95672 775 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 NPR1P16066 1061 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 GRM4Q14833 912 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 SGO2Q562F6 1265 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 PDZD4Q76G19 769 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 DHX40Q8IX18 779 aaKnown RBP18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 EIF3CQ99613 913 aaKnown RBP18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 SEPT9Q9UHD8 586 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 PCDHB4Q9Y5E5 795 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 ADGRG1Q9Y653 693 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 CRCPO75575 148 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 KCNJ6P48051 423 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 PPP1R18Q6NYC8 613 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 CELF1Q92879 486 aaKnown RBP18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 MMS19Q96T76 1030 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 ZNF408Q9H9D4 720 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 PLEKHG2Q9H7P9 1386 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 SLC12A2P55011 1212 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 BSPRYQ5W0U4 402 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 PHLDB2Q86SQ0 1253 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 CCDC197Q8NCU1 140 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 SLC5A4Q9NY91 659 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 ABCA9Q8IUA7 1624 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 ATP2C1P98194 919 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 TFDP1Q14186 410 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 SLMAPQ14BN4 828 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 DCAF4Q8WV16 495 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 RIOK1Q9BRS2 568 aaKnown RBP18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 CD209Q9NNX6 404 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 UBE2TQ9NPD8 197 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 CEP72Q9P209 647 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms